DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL5 and rpl501

DIOPT Version :9

Sequence 1:NP_001036387.1 Gene:RpL5 / 3355124 FlyBaseID:FBgn0064225 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_594180.1 Gene:rpl501 / 2543642 PomBaseID:SPAC3H5.12c Length:294 Species:Schizosaccharomyces pombe


Alignment Length:286 Identity:157/286 - (54%)
Similarity:201/286 - (70%) Gaps:2/286 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIA 65
            |.|:|.||:..||.|||.|:||||||||||||||||..|.|||||.|||||:||.||:.:|.||.
pombe     1 MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFVTCQIV 65

  Fly    66 YARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEF 130
            .:|:.||.|:..|:|.|||:|||:.||.|:.|||.||||||||.|.|:||...|.|.||..||..
pombe    66 SSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYEGVTEPEGEFE 130

  Fly   131 NVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVH 195
            ..|.::|||..|:.||||||.||:||:|||||||||.||||.||||..||||:..||:..:.:..
pombe   131 LTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETL 195

  Fly   196 RAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKS 260
            |.:|:|.|||:||..|.::|||.:::|||..|..||.:|.|||||.:|:..||.||:.:.:.|.:
pombe   196 RKYIYGGHVAEYMEMLIDDDEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDA 260

  Fly   261 SAVTKK--RWNAKKLTNEQRKTKIAA 284
            :|...:  :...:|||.|:||.:..|
pombe   261 AAFKAESLKHTQRKLTAEERKERFNA 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL5NP_001036387.1 PTZ00069 1..298 CDD:240254 157/286 (55%)
rpl501NP_594180.1 PTZ00069 1..291 CDD:240254 157/286 (55%)
Ribosomal_L18p 26..173 CDD:279233 93/146 (64%)
Ribosomal_L18_c 193..283 CDD:290906 37/89 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 212 1.000 Domainoid score I595
eggNOG 1 0.900 - - E1_COG0256
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H110649
Inparanoid 1 1.050 311 1.000 Inparanoid score I576
OMA 1 1.010 - - QHG53582
OrthoFinder 1 1.000 - - FOG0002632
OrthoInspector 1 1.000 - - otm47381
orthoMCL 1 0.900 - - OOG6_100789
Panther 1 1.100 - - LDO PTHR23410
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1142
SonicParanoid 1 1.000 - - X1734
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.