DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and RGD1565355

DIOPT Version :9

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001102688.1 Gene:RGD1565355 / 499985 RGDID:1565355 Length:472 Species:Rattus norvegicus


Alignment Length:486 Identity:113/486 - (23%)
Similarity:217/486 - (44%) Gaps:87/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ILLVIGFLAIITSTLIKVLEPYDLIFKWKLIMTEGGEIFNLWAQPPVDLYIKIYLFNITNANAFL 157
            ||:.:|.| :|..|:           |.::::.||...|..|.:....:|.:.::|::.|.....
  Rat    25 ILMPVGDL-LIEKTI-----------KREVVLEEGTIAFKNWVKTGTTVYRQFWIFDVQNPEEVA 77

  Fly   158 AGREQLRVEQVGPYVYK-EIMTHENVTFN-SNNTMSSTPSHPLVWQEEMSGNCREDDEVVMLNIA 220
            ....:::|:|.|||.|: ..:..||:|.: .::|:|....:..:::..:|.. .|:|...:.|:|
  Rat    78 KNSSKIKVKQRGPYTYRVRYLAKENITQDPKDSTVSFVQPNGAIFEPSLSVG-TENDNFTVPNLA 141

  Fly   221 MLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMFGYPSALATLGNTFLPNWISFEKVG 285
            :.|..|:..|.  .::..|..|:..:||......:.||.::||.....:|    :|         
  Rat   142 VAAAPHIYQNS--FIQGVLNNLIKKSKSSMFQTRSLKELLWGYKDPFLSL----IP--------- 191

  Fly   286 LIDRMYDFSTDFETFYTGVP-NPALSGLYA---------------SYRGETTLPQWDGDHCSNIE 334
                 |..||....||   | |..:.|:|.               :|:|:..|..|. .:|..|.
  Rat   192 -----YPISTTVGVFY---PYNNTVDGVYKVFNGKDNINKVAIIDTYKGKRNLSYWK-SYCDMIN 247

  Fly   335 FASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLKG---YNYVFEDNAFDNGATNE 396
             .:|...|..|::.:.|::||...:||  ::|.|...:.  :|||   |.:|...|||.:...|.
  Rat   248 -GTDAASFPPFVEKSRTLRFFSPDICR--SIYAVFESEV--NLKGIPVYRFVLPVNAFASPLQNP 307

  Fly   397 ANKCFCRK----GDCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGISPDPDKHSSTFV 457
            .|.|||.:    .:|...|::|:..|..|.|:.:|.|||::....:.:.:.|::|:.|:|.:...
  Rat   308 DNHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIQGLNPNEDEHRTYLD 372

  Fly   458 IQPESGLPLSLSVKVQINMHFKDLSNFPVV-SVFNHLTVPMLWF-----------EIMMSKLPDS 510
            ::|.:|..|..:.::|:|:..|.......: ::.....||:||.           ||..:::...
  Rat   373 VEPITGFTLQFAKRLQVNILVKPARKIEALRNLKRPYIVPILWLNETGTIGDEKVEIFRNQVTGK 437

  Fly   511 LDSRFNFYLNILPLVNPLGFWSGILLGISLL 541
                    :|:|.||..:....|:|:.::.:
  Rat   438 --------INLLDLVERVLLVVGVLMFVAFM 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 91..545 CDD:279474 113/486 (23%)
RGD1565355NP_001102688.1 CD36 16..461 CDD:279474 113/486 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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