DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and CG3829

DIOPT Version :10

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_611992.3 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster


Alignment Length:648 Identity:170/648 - (26%)
Similarity:279/648 - (43%) Gaps:98/648 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MFARRYS------SVSRDVEASNQRQSAVT---PGSGLSTDAD-PAVSCAAQVAL-QRIQRRKSL 60
            |.||:.|      ||::.:..::.|....|   .|.|::..|: |:|......|| .|.|.:...
  Fly    11 MPARQESDRTSAPSVTKSLTLNSTRSGVGTGNFGGYGMTNGAEKPSVLHMIMEALGLRNQAQNRE 75

  Fly    61 KANRSMNPIDILSSFFNEPIQGKRNRVPTRLFILLVIGFLAIITSTLIKVLEPYDLIFKWKLIMT 125
            ..::.:..:.:|...|             .||::.|.||.      ::...|.|:......||:.
  Fly    76 PTSKDIGTLIMLGVMF-------------LLFVISVTGFF------VMWFTEYYNNTILENLILA 121

  Fly   126 EGGEIFNLW--AQPPVDLYIKIYLFNITNANAFLAGR-EQLRVEQVGPYVYKEIMTHENVTFNSN 187
            |..:..|.|  ..|..|..:|.::|:..|.:.:|||| ::::|..|||..|:|....:.|:||.|
  Fly   122 ENSDTANSWLNPDPKYDTLLKAHIFHYPNIDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKN 186

  Fly   188 NTMS--STPSHPLVWQEEMSGNCREDDEVVML-NIAMLAISHLTANQPFLVRMALKTLLLSTKSE 249
            .|:|  ...|:..:.::...|    :.|||.: |:.:::.:..........|:|:.|.:...| |
  Fly   187 FTVSFRDRKSYKFLPEKSSIG----EHEVVRVPNVPLISAAGPVKRMKAFERLAVSTWIKQFK-E 246

  Fly   250 PIVRT-TAKEFMFGYPSA---LATLGNTFLPNWISFEKVGLIDRMYDFSTDFETFYTGVPNPALS 310
            |:.:. |..|:::||..:   |.:||.       ...:.||:......|.|.....||..:....
  Fly   247 PLFKNLTVSEYLWGYEDSIIKLKSLGR-------GRRRFGLLMSRNGTSVDSVQLNTGEDDITKF 304

  Fly   311 GLYASYRGETTLPQWDGDHCSNIEFASDGTKFKSF----IQPNETVKFFRKSMCRPINLYRVGNE 371
            .:...:.|...|..|:||.|:.|    ||::...|    :|...||..|.:.:||.:.|:.....
  Fly   305 SIITQFNGMPQLDYWEGDECNRI----DGSEPSMFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEV 365

  Fly   372 KTYGSLKGYNYVFEDNAFDNGATNEANKCFCRKGD-CQPVGLIDVTDCYYGFPISLSFPHFMNGD 435
            ..|..:....|....:.|.:.:.|.||:|:|:..: |.|.|:|:.|.||...||..|||||..||
  Fly   366 TIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTELCLPSGVINATKCYGDAPIFPSFPHFFTGD 430

  Fly   436 VGLQQNVTGISPDPDKHSSTFVIQPESGLPLSLSVKVQINMHFKDLSNFPVV-----SVFNHLTV 495
            ..|.|:..||.||...|.:...|.|..|.|:|.:.:||||:.   |...|::     .:.|...:
  Fly   431 PVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQINIM---LDKTPILRNQGDRLKNTTIL 492

  Fly   496 PMLWFEIMMSKLPDSLDSRFNFYLNILPL---VNPLGFWSGILLGISLLGYAITKATLHMSTFSR 557
            |::|.||......:.:  ....||:...|   ...|.:  |.|| ||:..:::..|.::... ||
  Fly   493 PLMWIEITSGDFSEEV--LHTLYLSTFGLNAIQQTLKY--GTLL-ISVTSFSLIVAGVYYLN-SR 551

  Fly   558 RAANITDVKYVRANLIQNIAGEAANHAYSPCDIKLLDDISVVRH---PVNKQTVQDSGFSSKT 617
            |...:.:.| ..|.|      ||.|..         :::.||.|   || ...|||.|....|
  Fly   552 REQQLQESK-TSAEL------EALNGG---------ENVIVVHHIDMPV-PLPVQDGGIHQGT 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 96..545 CDD:460076 129/471 (27%)
CG3829NP_611992.3 CD36 87..547 CDD:460076 134/502 (27%)

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