DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and emp

DIOPT Version :9

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster


Alignment Length:555 Identity:154/555 - (27%)
Similarity:265/555 - (47%) Gaps:63/555 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 IQGKRNRVPTRL--------FILLVIGFLAIITSTLI----KVLEPYDLIFKWKLIMTEGGEIFN 132
            :.|.:::..|:|        :|.:|:....||...::    .||  .|.:....:.:..|.:.|.
  Fly    32 MNGPKHKFCTKLSSTYLRKWWITIVVAAALIIGGIVVACEFTVL--IDAVVDRMVALRPGAKTFG 94

  Fly   133 LWAQPPVDLYIKIYLFNITNANAFLAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSSTPSHP 197
            .||:|||:..|.:|::|:|||:.||:...:..|::||||||.|.....|:..|.|.|:|......
  Fly    95 WWAKPPVEPRISLYIYNVTNADDFLSNGSKAIVDEVGPYVYSETWEKVNIVENDNGTLSYNLRKI 159

  Fly   198 LVWQEEMSGNCREDDEVVMLNIAMLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMFG 262
            ..::|::|.. .|||.|::.||.||:.:..:.:....:|:|:.:::...|.:|.|:.:..:.::|
  Fly   160 YSFREDLSVG-PEDDVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWG 223

  Fly   263 YPSALATLGNTFLP--NWISFEKVGLIDRMYDFSTDFETFYTGVPNPALSGLYASYRGETTLPQW 325
            |...|..|....:|  ..:.:|:.||:......|:|..|..|||.:....|:..::.|.|.||.|
  Fly   224 YEDPLLKLAKDVVPKEQKLPYEEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHW 288

  Fly   326 DGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLKGYNYVFEDNAFD 390
            ..|.|:.:. .:||:.|...|..:..:..:.|.:||.:.|.......|...:.||.:...:..|.
  Fly   289 TTDACNTLA-GTDGSIFPPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFA 352

  Fly   391 NGATNEANKCFCRKG--DCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGISPD-PDKH 452
            :..::..|.|||..|  .|.|.||.:|:.|.|..||.||||||...|..|:..|.||||. .:||
  Fly   353 DVDSHPDNMCFCPAGKPSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKH 417

  Fly   453 SSTFVIQPESGLPLSLSVKVQINM------HFKDLSNFPVVSVFNHLTVPMLWFEIMMSKLPDSL 511
            ...|.:||:.|..|.:..::|||:      ..|.::|||.: :|     |:||||..:..|||.:
  Fly   418 QFFFDVQPKMGTTLRVRARIQINLAVSQVFDIKQVANFPDI-IF-----PILWFEEGIDNLPDEV 476

  Fly   512 DSRFNFYLNILPLVNPLGFWSGILLGISLLGYAITKATLHMSTFSRRAANITDVKYVRANLIQNI 576
            .....|...:.|.:.     ..:::|:..||..:    |.:|||.               ||:| 
  Fly   477 TDLMRFAEQVPPKIR-----VALIVGLCALGVIL----LLLSTFC---------------LIRN- 516

  Fly   577 AGEAANHAYSPCDIKLLDDISVVRHPVNKQTVQDS 611
                 :|..|...::..:.::..:..:||:..:|:
  Fly   517 -----SHRQSTLHLEGSNYLATAQVDMNKKQNKDN 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 91..545 CDD:279474 140/476 (29%)
empNP_726504.2 CD36 58..511 CDD:279474 139/471 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450691
Domainoid 1 1.000 168 1.000 Domainoid score I2304
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I2746
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

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