DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40006 and scav-6

DIOPT Version :9

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_492081.1 Gene:scav-6 / 184107 WormBaseID:WBGene00008542 Length:590 Species:Caenorhabditis elegans


Alignment Length:567 Identity:117/567 - (20%)
Similarity:205/567 - (36%) Gaps:136/567 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 NRVPTRLFILLVI----------GFLAIITSTLIKVLEPYDLIFKWKLIMTE------GGEIFNL 133
            |::...|.::.::          .|.:|.::.:||.|:           :||      |...|. 
 Worm     8 NKLDVFLVVIAIVFIVFGIVTWAAFSSIYSTLVIKNLQ-----------LTENSDTSLGYSAFQ- 60

  Fly   134 WAQPPVDLYIKIYLFNITNANAFLAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSSTPSHP- 197
            :..|.||..:|.|.||:||.:..........:.::||:...|....:.:.|:.:.:.....::. 
 Worm    61 YTSPQVDNIMKFYFFNVTNPDEVKYYSAAPNLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKK 125

  Fly   198 -LVWQEEMSGNCREDDEVVMLNIAMLAISHLTANQPFLVRMALKTLL---LSTKSE-PIVRTTAK 257
             ::.::....:|..|..:|..|...|.......:..|.:....:|::   |:...| |.|....:
 Worm   126 YILSKDYSCEDCDWDRNIVFPNPPGLGAVASMLDPQFQITKTGRTIIAVALTILGEYPFVSHKVR 190

  Fly   258 EFMF-GYPSALATL----------------GNTFLPNWI-SFEKVGLIDRMYDFSTDFETFY-TG 303
            |.:| ||..||.:.                |.:.:|..| :..|.|.. :.|:.|.|.|.:. ||
 Worm   191 EVLFDGYEDALLSAAHSGFVTVLSGIFKGDGGSIVPIPIPAMPKFGYF-QGYNNSRDEEYWIETG 254

  Fly   304 VPNPALSGLYASYRGETTLP--QWDGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCR----- 361
            ..:....|....:.|.|.||  .|......:|..:..|:..:..:..:.|...|...|||     
 Worm   255 KKDINQIGNVQRWAGITELPGEWWTTPKARSIRGSDSGSFTQMHLDESSTADMFFSFMCRSFTKT 319

  Fly   362 ----------PINLYRVGNEK---TYGSLKGYNY--VFEDNAFDNGATNEANKCFCRKGDCQPVG 411
                      |...|.:|.::   |..:..|:.|  :.:.|.|.:..     || ..||.|...|
 Worm   320 FYQRETIESIPTIGYHIGYDEWDTTSDNNVGFRYRNIEKRNYFPDWP-----KC-PPKGQCHQSG 378

  Fly   412 LIDVTD----------------------------CYYG------FPISLSFPHFMNGDVGLQQNV 442
            .||.:.                            ||.|      |.:..|.|||:.....::..|
 Worm   379 SIDCSKSINFCHACCDGSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVYSPPHFLFSPDEVRTTV 443

  Fly   443 TGISPDPDKHS-STFVIQPESGLPLSLSVKVQINMHFKDLSNFPVVSVFNHLTVPMLWFEIMMSK 506
            .|::|:...|. ..:..:|.||..|.:..::|:||......:.|......::.:|:.|       
 Worm   444 VGMAPNKSLHEPMIYYHEPYSGTTLKVVNRLQVNMPVIRSHDVPSSQNMPNVMIPLFW------- 501

  Fly   507 LPDSLDSRFNFYLN-------ILP-LVNPLGFWSGILLGISLLGYAI 545
             .|:......|..|       ::| |:..|.|   :.|||.||..||
 Worm   502 -QDTSPKYHQFIFNEVWLGFVLVPRLMRVLQF---VALGIGLLLVAI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 91..545 CDD:279474 114/559 (20%)
scav-6NP_492081.1 CD36 18..547 CDD:279474 115/557 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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