DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40006 and scav-5

DIOPT Version :9

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_509651.2 Gene:scav-5 / 181200 WormBaseID:WBGene00011076 Length:536 Species:Caenorhabditis elegans


Alignment Length:529 Identity:115/529 - (21%)
Similarity:201/529 - (37%) Gaps:131/529 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 IGFLAIITSTLIKVLEPYDLIFKWKLIMTEGGEIFN---LWAQPPVDLYIKIYLFNITNAN--AF 156
            |.|..|..|         :|...:||...:.|.:..   |:|.||:...:|..|||:||.:  .:
 Worm    27 IAFWPIFNS---------ELRSNYKLGANDDGSLHYAAFLYANPPMKNVMKFNLFNVTNPDEVKY 82

  Fly   157 LAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSSTPSHPLVWQEEMSGNC--REDDEVVMLN- 218
            |..:.:|  .:||.|.:.|....:...|:|:.|.....::......|:..:.  ..:|:::..| 
 Worm    83 LGAKPEL--IEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYNYNDKIMFPNS 145

  Fly   219 IAMLAISHLTANQ---------------------PFLVRMALKTLLLSTKSEPIVRTTAKEF--- 259
            ||..|:|.:...|                     ||:.: .:|.:|:....:|::.......   
 Worm   146 IAEGAVSTVFGPQSEFSPTAKILVSIGLVMLGEYPFISK-TVKDVLMDGYEDPLLSVAHSGIFIS 209

  Fly   260 ---MFGYPSALATLGNTFLPNWISFEKVGLIDRMYDFSTDFETFY--TGVPNPALSGLYASYRGE 319
               .:||.|.|     .::|...:|..:...:..||     |.::  ||..:....|...|:.|.
 Worm   210 LVNFYGYGSQL-----NYIPEMKTFAYLSGYNNSYD-----ENYWINTGYNDFNKLGFVESWAGL 264

  Fly   320 TTLPQ--WDGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTY---GSLKG 379
            ..||.  |.......|:....|:..|..:...:.:.||...|||..       ::||   |.:.|
 Worm   265 EQLPASFWPTLEARQIKGPDSGSLSKIHLTKTDELPFFLSFMCRSF-------KRTYWQDGLVDG 322

  Fly   380 ------------YNYVFEDNA---FDNGATNEANKCFCRK------GDCQ---------PVGLID 414
                        ::...|.||   :.|....:....:|.|      ..||         |.|:..
 Worm   323 IKTMAFAVPYEEFDTTLEKNAGFRYKNQENVDYFPDWCDKNTTTSLSQCQKTANGTFLLPPGIFP 387

  Fly   415 VTDCYYG------FPISLSFPHFMNGDVGLQQNVTGISPDPDKHS-STFVIQPESGLPLSLSVKV 472
            :. ||.|      |.:.:|.|||:.....:|.:::|::|||:||. ..|..:..||..|.:.|:.
 Worm   388 LV-CYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVFHQEKTSGTALQVDVRF 451

  Fly   473 QINMHFKDLSNFPVVSVFNHLTVPMLWFEIMMSKLPDSLDSRFNFYLNILPLVNPL---GFWSGI 534
            |:|:        |||:...         .||.|::|:.:...  ||.:...||...   ..|.|:
 Worm   452 QVNL--------PVVNNKG---------SIMSSQMPNVIIPL--FYEDSHALVKDFVMDTVWLGV 497

  Fly   535 LLGISLLGY 543
            ::...::.|
 Worm   498 IIVPRIIEY 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 91..545 CDD:279474 115/529 (22%)
scav-5NP_509651.2 CD36 15..524 CDD:279474 115/529 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.876977 Normalized mean entropy S6407
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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