DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and scav-2

DIOPT Version :9

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_499802.3 Gene:scav-2 / 176787 WormBaseID:WBGene00013578 Length:558 Species:Caenorhabditis elegans


Alignment Length:601 Identity:130/601 - (21%)
Similarity:233/601 - (38%) Gaps:124/601 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ANRSMNPIDILSSFFNEPIQGKRNRVPTRLFIL--LVIG------FLAIITSTLI--KVLEPYDL 116
            :|.|.|.....|...::...|:..|:.....::  ::||      |.::||.|::  ||::.   
 Worm     4 SNNSSNGASSSSPIASKYSSGRMRRMSCCQLVISAVLIGLGSFLLFGSLITHTVVVPKVVKS--- 65

  Fly   117 IFKWKLIMTEGGEIFNLWAQPPVDLYIKIYLFNITNANAFLAGREQLRVEQV---GPYVY----- 173
            ..:....:..|..::..||.|...:...:|:::..|.:.|:.|    .:.:|   ||||:     
 Worm    66 SIEENSRLVNGSIMWEKWAMPEYKIRFNMYVYSTKNPDEFMNG----AIPEVTGSGPYVFDKKME 126

  Fly   174 KEIMTHEN--------VTFNSNNTMSSTPSHPLVWQEEMSGNCREDDEVVMLNIAMLAISHLTAN 230
            ..:::.||        .|:|.|             ::|....|...:.:.:.|  |:....:.|.
 Worm   127 NRVVSAENGTVKYRRFFTYNFN-------------EQESCQTCILGNRIWVPN--MIYQKFVEAA 176

  Fly   231 QPFLVRMALKTLLLSTKSEPIVRTTAKEFMF-GYPSALATLGNTFLPN-----WISF-------- 281
            ....::.|..|||..|   ..:....:|.:| ||.       :.||..     :::|        
 Worm   177 STEGMKAAATTLLSQT---AFLEVEVEELLFEGYK-------DPFLDKVCEIPFMNFVCEAILDV 231

  Fly   282 -EKVGLIDRMYDFSTDFETFYTGVPNPALSGLYASYRGETTLPQ--WDGDHCSNIEFASDGTKFK 343
             |::||..:.....:.......|..||...|...||.....|.:  |..|....|: .:||:.|.
 Worm   232 PERIGLFFKANGTGSKVYEIDDGTRNPDDLGKILSYDESPILDETWWSTDESLKIK-GTDGSLFH 295

  Fly   344 SFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLKGYNYVFEDNAFDNGATNEANKCFCR----- 403
            .|:..:|.:..:...:||.|.| ....|..|..||.|.:|.....||  .|:..|:.||.     
 Worm   296 PFLSKHEKLYVYVAELCRSIWL-EFKEEVEYRGLKAYRFVVPPEVFD--VTHPGNQGFCNPSEKQ 357

  Fly   404 -------KGDCQPVGLIDVTDCYYGF-PISLSFPHFMNGDVGLQQNVTGISPDPDKHSSTFV-IQ 459
                   ..:|.|.||::::.|.... ||::|.|:|:.....::.:|.|::...:...|..| |:
 Worm   358 FYESQNDSSNCMPKGLLEISKCQQSQPPITISLPNFLFAPSEVRGSVKGLNETDEIRDSIVVDIE 422

  Fly   460 PESGLPLSLSVKVQINMHF---KDLSNFPV-VSVFNHLTVPMLWFEIMMSKLPDSLDS-RFNFY- 518
            |..|..|......|:|:..   |:|: ||| :.......:|:|..........|||:. |...| 
 Worm   423 PRVGAVLYARRVSQVNIEMWKGKNLT-FPVNLKKMKSALIPVLILHETSEIDDDSLEQIRSQLYE 486

  Fly   519 --------LNILPLVNPLGFWSGILLGISLLGYAITKATLHMSTFSRRAANITD---VKYV---R 569
                    .:::.::..:    .:|||...|.:::......:...|:||..::.   ..||   .
 Worm   487 TESIAYTSCDVMMIIGAI----MLLLGFLFLSFSLGLCDPILGRRSKRANGLSPEPLPPYVPKGE 547

  Fly   570 ANLIQNIAGEAANHAY 585
            .|      |...||||
 Worm   548 PN------GYHHNHAY 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 91..545 CDD:279474 113/524 (22%)
scav-2NP_499802.3 CD36 46..505 CDD:279474 107/499 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I2304
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I2746
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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