DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and emp

DIOPT Version :10

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_314346.4 Gene:emp / 1275121 VectorBaseID:AGAMI1_005870 Length:522 Species:Anopheles gambiae


Alignment Length:572 Identity:160/572 - (27%)
Similarity:262/572 - (45%) Gaps:89/572 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GKRNRVPTRL---------FI------LLVIGFLAIIT---STLIKVLEPYDLIFKWKLIMTEGG 128
            |:.||:..:|         |:      |||:|  |::|   :..|:.      |...::.:..||
Mosquito     3 GRSNRLCAKLSSAFLRKWWFVIAFALSLLVLG--ALVTFGFTAFIRT------IIDHQVALRVGG 59

  Fly   129 EIFNLWAQPPVDLYIKIYLFNITNANAFLAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSST 193
            :.|..|::|||:..|:|:::|:|||:.||....:..::::|||||.:.....|:..|.|.|:|..
Mosquito    60 QSFGWWSRPPVEPIIRIFVYNVTNADEFLNNGTKPILDELGPYVYVQTWEKVNIKENPNGTISYN 124

  Fly   194 PSHPLVWQEEMSGNCREDDEVVMLNIAMLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKE 258
            .....::.|::||.. |||.|::.||.||:.:..:.:....:|:|:.:::...|.:|.|..:..:
Mosquito   125 QKRVYIFNEDLSGGL-EDDVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVEVSVGQ 188

  Fly   259 FMFGYPSALATLGNTFLP--NWISFEKVGLIDRMYDFSTDFETFYTGVPNPALSGLYASYRGETT 321
            .::||...|..|....:|  ..:.:|:.||:......|.|..|.:|||.:....|:...|.|.:.
Mosquito   189 LLWGYEDPLLKLAKDVVPKEQKLPYEEFGLMYGKNSTSKDTVTVWTGVDDITQYGIIDKYNGRSH 253

  Fly   322 LPQWDGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLKGYNYVFED 386
            ...|..:.|:.:. .:||:.|...|..|.|:..:.|.:||.:.|.........|.:|||.:....
Mosquito   254 QTHWLSEQCNRLN-GTDGSIFPPRITKNSTLHVYEKDLCRLLPLSFEKEVTVRGGVKGYRFTPSP 317

  Fly   387 NAFDNGATNEANKCFCRKG-DCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGIS-PDP 449
            :.|.:...|..|.|:|..| .|.|.||.:|:.|.|..||.||||||...|..|:..|.||| |:.
Mosquito   318 DVFASVDKNPNNMCYCPAGPPCAPHGLFNVSLCQYDSPILLSFPHFYMADQTLRTAVEGISPPEK 382

  Fly   450 DKHSSTFVIQPESGLPLSLSVKVQINM------HFKDLSNFPVVSVFNHLTVPMLWFEIMMSKLP 508
            |||.....:||:.|..|....::|||:      ..|.::|||.: ||     |:||||..:..||
Mosquito   383 DKHQLFIDVQPDMGTALRARARIQINLAVSQVVDIKQVANFPDI-VF-----PILWFEEGIDSLP 441

  Fly   509 DSLDSRFNFYLNILPLVN--------PLGFWSGILLGISLLGYAITKATLHMSTFSRRAANITDV 565
            |.:........||.|...        .||.:..::..|.|:..:..::|||:             
Mosquito   442 DEILDLMKVATNIPPRAKFILTIALFGLGGFLFVVAVICLVRKSHRQSTLHL------------- 493

  Fly   566 KYVRANLIQNIAGEAANHAYSPCDIKLLDDISVVRHPVNKQTVQDSGFSSKT 617
                         |.:|:         |...||  ....|:...|:|.|||:
Mosquito   494 -------------EGSNY---------LATASV--DQAKKKAKMDNGMSSKS 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 96..545 CDD:460076 139/469 (30%)
empXP_314346.4 CD36 24..481 CDD:460076 140/472 (30%)

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