DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40006 and Cd36

DIOPT Version :10

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_031669.3 Gene:Cd36 / 12491 MGIID:107899 Length:472 Species:Mus musculus


Alignment Length:475 Identity:119/475 - (25%)
Similarity:222/475 - (46%) Gaps:63/475 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 VIG-FLAIITSTLIKVLEPYDLI----FKWKLIMTEGGEIFNLWAQPPVDLYIKIYLFNITNANA 155
            ||| .||:....|:.|   .|::    .|.::::.||...|..|.:....:|.:.::|::.|.:.
Mouse    14 VIGAVLAVFGGILMPV---GDMLIEKTIKREVVLEEGTTAFKNWVKTGTTVYRQFWIFDVQNPDD 75

  Fly   156 FLAGREQLRVEQVGPYVYK-EIMTHENVTFN-SNNTMSSTPSHPLVWQEEMSGNCREDDEVVMLN 218
            ......:::|:|.|||.|: ..:..||:|.: .::|:|....:..:::..:|.. .|||...:||
Mouse    76 VAKNSSKIKVKQRGPYTYRVRYLAKENITQDPEDHTVSFVQPNGAIFEPSLSVG-TEDDNFTVLN 139

  Fly   219 IAMLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMFGY--------PSALATLGNTFL 275
            :|:.|..|:..|.  .|::.|.:|:..:||......:.||.::||        |..::|....|.
Mouse   140 LAVAAAPHIYQNS--FVQVVLNSLIKKSKSSMFQTRSLKELLWGYKDPFLSLVPYPISTTVGVFY 202

  Fly   276 PNWISFEKVGLIDRMYDFSTD--FETFYTGVPNPALSGLYASYRGETTLPQWDGDHCSNIEFASD 338
            |              |:.:.|  ::.| .|..|.:...:..||:|:..|..|. .:|..|. .:|
Mouse   203 P--------------YNDTVDGVYKVF-NGKDNISKVAIIESYKGKRNLSYWP-SYCDMIN-GTD 250

  Fly   339 GTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGS---LKG---YNYVFEDNAFDNGATNEA 397
            ...|..|::.:.|::||...:||  ::|.|     :||   |||   |.:|...|||.:...|..
Mouse   251 AASFPPFVEKSRTLRFFSSDICR--SIYAV-----FGSEIDLKGIPVYRFVLPANAFASPLQNPD 308

  Fly   398 NKCFCRK----GDCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGISPDPDKHSSTFVI 458
            |.|||.:    .:|...|::|:..|..|.|:.:|.|||::....:.:.:.|:.|:.|:|.:...:
Mouse   309 NHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLHPNEDEHRTYLDV 373

  Fly   459 QPESGLPLSLSVKVQINMHFKDLSNFPVV-SVFNHLTVPMLWFEIMMSKLPDSLDSRFN-FYLNI 521
            :|.:|..|..:.::|:|:..|.......: ::.....||:||    :::.....|.:.. |...:
Mouse   374 EPITGFTLQFAKRLQVNILVKPARKIEALKNLKRPYIVPILW----LNETGTIGDEKAEMFKTQV 434

  Fly   522 LPLVNPLGFWSGILLGISLL 541
            ...:..||.....||||.::
Mouse   435 TGKIKLLGMVEMALLGIGVV 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 96..545 CDD:460076 119/475 (25%)
Cd36NP_031669.3 CD36 14..463 CDD:460076 119/475 (25%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:15748999 93..120 6/26 (23%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.