DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40006 and cd36

DIOPT Version :10

Sequence 1:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001107151.1 Gene:cd36 / 100135002 XenbaseID:XB-GENE-493679 Length:470 Species:Xenopus tropicalis


Alignment Length:429 Identity:112/429 - (26%)
Similarity:199/429 - (46%) Gaps:59/429 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GFLAIITSTLIKVLEPYDLIFKWKL----IMTEGGEIFNLWAQPPVDLYIKIYLFNITNANAFLA 158
            |.|||:...|..|   .|:|...::    ::.||...:..|.:....:|...:::::||.:..:.
 Frog    17 GLLAILGGILFPV---GDMIINKEISTEAVIEEGTIAYENWIEAGSPVYRHFWIYHVTNPDEIIN 78

  Fly   159 GREQLRVEQVGPYVYK-EIMTHENVTFNSNNTMSSTPSHPLVWQEEMSGNCREDDEVVMLNIAML 222
            |.:.: ::|.|||.|: ..:..||:|...|||:|....:..::|.|.|.. .|:|...:||   |
 Frog    79 GGKPI-LQQKGPYTYRVRYLPKENITQLENNTVSYWQPNGAIFQREGSYG-PEEDTYTVLN---L 138

  Fly   223 AISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMFGYPSALATLGNTFLPNWISFEKVGLI 287
            |::...|..|.|..: |..::.|:.|......:.||.::||       .:.||      ||:. |
 Frog   139 AVAAAPAMFPALQGL-LNAIIKSSNSSLFQVRSVKELLWGY-------RDPFL------EKIP-I 188

  Fly   288 DRMYDFSTDFETFYTGVPNPALSGLYASYRGE---------------TTLPQWDGDHCSNIEFAS 337
            |.: |.:|..  ||..  |....|:|..|.|:               ..||.|:.|.|..|. .:
 Frog   189 DSI-DKTTGL--FYPN--NGTADGIYHVYNGKGDISKVAIIDRYKEAKALPYWNDDFCDMIN-GT 247

  Fly   338 DGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTY--GSLKGYNYVFEDNAFDNGATNEANKC 400
            |...|...::.::.:.||...:||  ::|.: .||.|  ..:|.|.:|..::|..:...|..|.|
 Frog   248 DAASFPPSVKKDKRLYFFSSEICR--SIYGI-FEKEYMVKGIKLYRFVVTEDAMASPTKNPDNHC 309

  Fly   401 FCR----KGDCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNVTGISPDPDKHSSTFVIQPE 461
            ||:    ..:|...|::|:..|..|.||.||.|||:.....|..:|:|:.|:.::|.:...::|.
 Frog   310 FCKDFQLSRNCTAAGVLDLRSCQGGKPIFLSLPHFLYASDYLLDSVSGLKPNKEEHETYIDVEPI 374

  Fly   462 SGLPLSLSVKVQINMHFKDLSNFPVVS-VFNHLTVPMLW 499
            :|..:..:.::|:|:..:......|:| :.:.|..|:.|
 Frog   375 TGFTMHFAKRLQVNVMIQPTDKIEVMSKLQSELVFPVAW 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40006NP_001036401.1 CD36 96..545 CDD:460076 112/429 (26%)
cd36NP_001107151.1 CD36 14..459 CDD:460076 112/429 (26%)

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