DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and AT4G19820

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_001320000.1 Gene:AT4G19820 / 827726 AraportID:AT4G19820 Length:368 Species:Arabidopsis thaliana


Alignment Length:353 Identity:97/353 - (27%)
Similarity:159/353 - (45%) Gaps:48/353 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1919 WYRSSQGKFVPEDIDANLCTHLIYGFAVLDSKSLTIKTHDSWTDIDNR------FYERVVEYKQR 1977
            |:..|:....  .||::|.|||...||  |..:||.:     ..:.:|      .:.:.|..:..
plant    31 WFAESESPLA--QIDSSLFTHLFCAFA--DINTLTYQ-----VIVSSRNKPKFSTFTQTVRRRNP 86

  Fly  1978 GLRVMLAIGGWNDSLGSKYARLVLNSQSRRRFVASVISFLEQHGFEGLDLAWEFPVCWQVNCNRG 2042
            .::.:|:||| :.:....:|.:..|..||:.|::|.|......||.||||.|::|         .
plant    87 TVKTLLSIGG-DFTYNFAFASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP---------S 141

  Fly  2043 NPTEKDGFVALVKEL-----SEAFKENG---LILSAAVSPSKMVIDAGYNVFELSPYFDWVAVMT 2099
            ..||.|.|..|::|.     :|| :.:|   |:|:|||..|.......:.|..::...|||.::.
plant   142 ITTEMDNFGKLLREWRLAVEAEA-RSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVA 205

  Fly  2100 YDFHGHWDMR-TGQIAPLFH--RGGDENLYLNGNFSIHYWLERGIPNDKLVMGMPMYGQTFTLAD 2161
            |||:.....| |...|||:.  ..|.     :|:..:..|.:.|:|..|.|:|.|:||..:.|.|
plant   206 YDFYESGSSRVTCSPAPLYDPITTGP-----SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCLTD 265

  Fly  2162 QNRRSLNDKTVGPGKAGTFTRADGFLAYYEICEKVVNDDWKVVRDEEGIFGSYAYSGNQWISYDD 2226
            ....:....:.||.     ...||.:.|.:|...:|::...:|.: ..:..:|.|:...||.|||
plant   266 AKNHNYYANSSGPA-----ISPDGSIGYDQIRRFIVDNKATMVYN-SNLVQNYCYAKKTWIGYDD 324

  Fly  2227 VTTIRRKSQFIKSLQLGGGMIWALDLDD 2254
            ..:|..|.::.|...|.|...|.:..||
plant   325 NQSIVMKVKYAKQRGLLGYFSWHIGADD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753 95/350 (27%)
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351 97/353 (27%)
AT4G19820NP_001320000.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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