DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and AT4G19770

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_193712.2 Gene:AT4G19770 / 827721 AraportID:AT4G19770 Length:261 Species:Arabidopsis thaliana


Alignment Length:272 Identity:85/272 - (31%)
Similarity:121/272 - (44%) Gaps:27/272 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  2002 NSQSRRRFVASVISFLEQHGFEGLDLAWEFPVCWQVNCNRGNPTEKDGFVALVKE-----LSEAF 2061
            :|..|:.|:.|.||....:||:||||.||:|         .|..|...|..|:||     ..||:
plant     4 SSYGRKSFILSTISIARSYGFDGLDLDWEYP---------RNAAEMSDFAELLKEWRYAVQGEAY 59

  Fly  2062 KEN--GLILSAAVSPSKMVIDAGYNVFELSPYFDWVAVMTYDFHGHWDMR-TGQIAPLFHRGGDE 2123
            ...  .|||:|.|..|.......|.|..:|...|||.:..|||:|..... ||..|.|:.:....
plant    60 SSELPVLILTATVYYSSNYNGVVYPVKFISELLDWVNIKAYDFYGPGCTEVTGPPAALYLQSDGP 124

  Fly  2124 NLYLNGNFSIHYWLERGIPNDKLVMGMPMYGQTFTLADQNRRSLNDKTVGPGKAGTFTRADGFLA 2188
                :|:..:..|::.|:|.:|.|:|.|.||..:||||.........|.||..:.     ||.::
plant   125 ----SGDSGVKDWIDAGLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAISD-----DGEIS 180

  Fly  2189 YYEICEKVVNDDWKVVRDEEGIFGSYAYSGNQWISYDDVTTIRRKSQFIKSLQLGGGMIWALDLD 2253
            |.::...:|::....|.|.. :.|.|.|:|..||.||...:|..|..:.|...|.|...|.:..|
plant   181 YSQLKTWIVDNKATTVHDNI-VIGDYCYAGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVGGD 244

  Fly  2254 DFRGLCGCGKHP 2265
            |...|...|..|
plant   245 DKSELSSAGSSP 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753 80/258 (31%)
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351 85/272 (31%)
AT4G19770NP_193712.2 GH18_chitinase-like <1..250 CDD:299167 82/264 (31%)
Glyco_18 <1..244 CDD:214753 80/258 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I962
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1002
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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