DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and Chia1

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_075675.2 Gene:Chia1 / 81600 MGIID:1932052 Length:473 Species:Mus musculus


Alignment Length:479 Identity:181/479 - (37%)
Similarity:253/479 - (52%) Gaps:49/479 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   963 SHYKVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADVENNFYTR 1027
            |.|.:||||||||.||.|:|.|.|||||..||||:||.||.:..:|:   |...|.||  ..|..
Mouse    20 SAYNLICYFTNWAQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNNEI---TTIEWNDV--TLYKA 79

  Fly  1028 VTSLKSKG--IKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPV 1090
            ...||::.  :|..||:||||.... .::.:|.:...|..|:...::|:.:|||:||||||||| 
Mouse    80 FNDLKNRNSKLKTLLAIGGWNFGTA-PFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYP- 142

  Fly  1091 CWQTECNKGS-TEEKDGFTAWVQELSEAF--------RPRGLMLSTAVSPSRKIIDAGYDIPQLS 1146
                 .::|| .::|..||..|:|:.|||        ||| ||::.||:.....|.|||:||:||
Mouse   143 -----GSRGSPPQDKHLFTVLVKEMREAFEQEAIESNRPR-LMVTAAVAGGISNIQAGYEIPELS 201

  Fly  1147 RYFDWIAVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPL 1209
            :|.|:|.|||||.||.|:..||..:|||.:|.:  ...|.||:|.:|||...|||::||::|.|.
Mouse   202 KYLDFIHVMTYDLHGSWEGYTGENSPLYKYPTETGSNAYLNVDYVMNYWKNNGAPAEKLIVGFPE 266

  Fly  1210 YGQSFTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRMGPYAYK 1274
            ||.:|.|.|.:.:|:.|.....|.||.:||.|||.||||||..: |.|...|.|....: |||||
Mouse   267 YGHTFILRNPSDNGIGAPTSGDGPAGPYTRQAGFWAYYEICTFL-RSGATEVWDASQEV-PYAYK 329

  Fly  1275 GTQWVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVL------- 1331
            ..:|:.||:......|:..::....||.|:||:|||||... |..|..||.:.::..|       
Mouse   330 ANEWLGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTLNKALGISTEGC 394

  Fly  1332 --KDPPSLMEIPGPIETTPTEYPGMEEEIHESNGEGPEVQPIEAVMQTCENEGEEHEGILDPNHV 1394
              .|.||     .|:.|.|....|.......|.|.|......:.:....::.....:.|   |.:
Mouse   395 TAPDVPS-----EPVTTPPGSGSGGGSSGGSSGGSGFCADKADGLYPVADDRNAFWQCI---NGI 451

  Fly  1395 LEEENIEATEMATEFKIICYFTNW 1418
            ..:::.:|   ...|...|...||
Mouse   452 TYQQHCQA---GLVFDTSCNCCNW 472

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 153/356 (43%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 161/377 (43%)
Glyco_18 1410..1753 CDD:214753 3/9 (33%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 3/8 (38%)
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Chia1NP_075675.2 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 161/377 (43%)
Glyco_18 24..365 CDD:214753 153/355 (43%)