DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and chia.2

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:473 Identity:173/473 - (36%)
Similarity:254/473 - (53%) Gaps:53/473 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   969 CYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDY-SELVLRTHDSWADVENNFYTRVTSLK 1032
            ||||||:.||.|||::||.:::..||||:.|.||:::: :||:  |:: |.|  ...|.....||
Zfish    25 CYFTNWSQYRPGIGKYTPANVDPFLCTHLFYAFAMINHANELI--TYE-WND--ETLYKAFNELK 84

  Fly  1033 SKG--IKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPVCWQTE 1095
            :..  ::..||:||||.. ..::|.:|.|...|..|::.:::|:..|||:|:|||||||      
Zfish    85 NTNPHLRTLLAVGGWNFG-STQFSIMVSSAANRQTFIQSSIKFLRTYGFDGMDLDWEYP------ 142

  Fly  1096 CNKGS-TEEKDGFTAWVQELSEAFRPRG-------LMLSTAVSPSRKIIDAGYDIPQLSRYFDWI 1152
            .::|| .|:|..||...:||.||:...|       ||||.|||..:..||.||:|.::::|.|:|
Zfish   143 GSRGSPPEDKQRFTLLCKELLEAYEAEGKATGRRRLMLSAAVSAGKGTIDDGYEIAEIAKYLDFI 207

  Fly  1153 AVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPLYGQSFT 1215
            .:|||||||.|::.|||.:|||....|  |..|||.:|::.||.:.|.|.:||.||...||::|.
Zfish   208 NIMTYDFHGTWERFTGHNSPLYQGSKDEGDLVYFNTDYAMRYWRDNGTPVEKLRMGFATYGRTFR 272

  Fly  1216 LENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRMGPYAYKGTQWVS 1280
            |.::::| :.|.|..|..||.:||.|||.:|||||..:.....|.:.|:   ..|||.|.::||.
Zfish   273 LTSSDTS-VGAPASGPASAGTYTREAGFWSYYEICGFLEGTTVQWIDDQ---KVPYATKNSEWVG 333

  Fly  1281 YDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVLKD-----PPSLME 1339
            :|:.:....|...::..|.||..|||||||||..: ||.|.|||:..:.|:|..     ||....
Zfish   334 FDTKESYETKVRYLKDKKFGGAFVWALDLDDFAGQFCGQGNHPLMGHLRNLLDIELPPLPPPTTA 398

  Fly  1340 IPGPIETTPTEYPGMEEEIHESNGEGPEVQPIEAVMQTCENEGEEHEGILDPNHVLE----EENI 1400
            .||...|.||     ......::..||..         |..:.:......|||....    :..:
Zfish   399 KPGQSTTRPT-----TTTTTTTHAPGPGF---------CNGKPDGLYAHPDPNKYYSCAGGQTYV 449

  Fly  1401 EATEMATEFKIICYFTNW 1418
            :.....|||...|....|
Zfish   450 DNCGAGTEFDESCKCCGW 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 143/353 (41%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 154/375 (41%)
Glyco_18 1410..1753 CDD:214753 2/9 (22%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 2/8 (25%)
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 154/375 (41%)
Glyco_18 24..363 CDD:214753 143/353 (41%)
CBM_14 423..468 CDD:279884 9/45 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6443
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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