DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht10 and chia.1

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:398 Identity:146/398 - (36%)
Similarity:224/398 - (56%) Gaps:30/398 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   963 SHYKVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADVENNFYTR 1027
            |..|::||.|||:.||.|.|:|.|::|:..|||||:|..|.:.|...:  |...|.||:  .|..
Zfish    20 SSTKLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALATISYDNQI--TTIEWNDVD--LYKS 80

  Fly  1028 VTSLK--SKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPV 1090
            :..||  :..:|..|::||..:.. ..|..:|.:|..|..|:|:||.|:..:.|:|:|:||:|| 
Zfish    81 MNELKKVNPALKTQLSVGGLVNGV-SPYINMVATPENRKAFIRNALLFLRLHEFDGMDIDWQYP- 143

  Fly  1091 CWQTECNKGSTEEKDGFTAWVQELSEAFRPRG-------LMLSTAVSPSRKIIDAGYDIPQLSRY 1148
                ..|....::|...|.:::|:.:|.....       |:||..||..:..|:..|:..:::..
Zfish   144 ----GHNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSIKVSAIKTTIENAYEAKEVASL 204

  Fly  1149 FDWIAVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPLYG 1211
            .|::.:|:||:|||||..|||.:||:....|  ...:.|:|.|:.:|:..|||:.:|::|:|.||
Zfish   205 VDFVTIMSYDYHGHWDPITGHNSPLFRSSFDTGSIVHHNINSSLEFWLGSGAPADRLLLGLPTYG 269

  Fly  1212 QSFTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVH--DEFGRMGPYAYK 1274
            ::|.| :|:.:||.|.|..|.:||.:||.|||.:|||||.   .:....:|  ||  :|.|||.:
Zfish   270 RTFML-STSQTGLGAPANGPADAGPYTREAGFWSYYEICP---MESSVPIHWIDE--QMVPYAVQ 328

  Fly  1275 GTQWVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVLKDPPSLM 1338
            |..||.:|:.:.:..|...:.||||||..||.||.|||..| |.||.:||:..:.|.|..||...
Zfish   329 GRAWVGFDNQESITAKVQWLNSLKLGGASVWTLDFDDFAGRFCYNGAYPLVNHLRNSLGFPPKPT 393

  Fly  1339 EIPGPIET 1346
            ..|.|..|
Zfish   394 TTPRPTTT 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 129/356 (36%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 138/377 (37%)
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753 129/356 (36%)
GH18_chitolectin_chitotriosidase 24..386 CDD:119351 138/377 (37%)
ChtBD2 407..455 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592038
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6443
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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