DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and btb-18

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_872066.2 Gene:btb-18 / 353391 WormBaseID:WBGene00018201 Length:298 Species:Caenorhabditis elegans


Alignment Length:247 Identity:44/247 - (17%)
Similarity:86/247 - (34%) Gaps:86/247 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   645 STTITSTFPWWSSTTKRP--REPTKTTAQPTHTTILIPAGINPVVQPSNCKSGEFFADSN----- 702
            :.|:|..|.|.:...:.|  ||         |..::....:.|.::|......|.|..|.     
 Worm    88 AVTLTDRFKWATVIVENPTRRE---------HVEVMFEYSLTPWLRPLPFSRDEIFLPSEKNDAV 143

  Fly   703 --------NCNAYYHCFFAGELQQQFCPSGLHWNNEAKGCDWPSSAQCSLK------LDQHLSTS 753
                    :.|..:.|:.:...::.|      ::|..|    .:|.:..|:      ....:||.
 Worm   144 LVIGERKLHVNKDFLCYHSDHFRELF------FSNLKK----DASVEIELRDVVYEDFGHLMSTI 198

  Fly   754 YPNPIQTSKKPETTLKPNKKPSE----ISTHHQVNSTSSRPQYMRPTILECTEGDYYPHRNCRKY 814
            :|||:          .||.:..|    ::...:|.|..                |:..|.     
 Worm   199 HPNPV----------FPNDRSVEKILVLADRFKVQSAI----------------DHVEHH----- 232

  Fly   815 YICVNKALVPSECGGDLHW----DGIKKLCDWPENVQCVTSKKYLKIIKSSS 862
              .::.:.:.:||   :.|    .|:|||.  ..::|.:.|.:..|.:|:|:
 Worm   233 --LLHNSRLANEC---MMWMADKYGMKKLL--KISIQNIGSLENAKNLKNST 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696 7/52 (13%)
CBM_14 801..848 CDD:279884 9/50 (18%)
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
btb-18NP_872066.2 BTB 141..237 CDD:197585 19/138 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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