DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and chia.4

DIOPT Version :10

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_956740.1 Gene:chia.4 / 337333 ZFINID:ZDB-GENE-030131-9279 Length:475 Species:Danio rerio


Alignment Length:409 Identity:149/409 - (36%)
Similarity:228/409 - (55%) Gaps:41/409 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   966 KVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADVENNFYTRVTS 1030
            ::.|||.||:.||..:|::.|.:::..||||:||.|:|::....:..:  .|.|  ...|....:
Zfish    22 QLACYFANWSQYRPDVGKYMPSNVDPHLCTHLIYAFSVINIKNKLATS--EWND--ETLYQSFNA 82

  Fly  1031 LK--SKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPVCWQ 1093
            ||  :..:|..||:|..| ....::||:|.:|..|..|:..:::|:..:||:|||||||||    
Zfish    83 LKQSNPNLKTLLAVGTLN-LGSTQFSRMVSTPQKRQTFIESSIKFLRTHGFDGLDLDWEYP---- 142

  Fly  1094 TECNKGSTEEKDGFTAWVQELSEAF--------RPRGLMLSTAVSPSRKIIDAGYDIPQLSRYFD 1150
             ...:...|:|..||...:||.:|:        ||| |||:.||:..:.||||||:|.::|:|.|
Zfish   143 -GSGESPPEDKHRFTLLCKELLKAYQAESKATRRPR-LMLTAAVAARKGIIDAGYEIAEVSKYLD 205

  Fly  1151 WIAVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPLYGQS 1213
            :|.:|||||||.|:..|||.:|||....|  |..|:|.::::.||.::|||.:||.||...||::
Zfish   206 FINIMTYDFHGSWENVTGHNSPLYRDSRDTGDQIYYNTDFAMTYWRDQGAPVEKLRMGFAAYGRT 270

  Fly  1214 FTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRMGPYAYKGTQW 1278
            |.|.:. .:||.|....|..||.:||.||:.:|||||..:.|...:.:.|:   ..|||.:|..|
Zfish   271 FCLSSA-VNGLGAPVSGPASAGTYTREAGYWSYYEICTFLQRASVEQIADQ---KVPYATEGLNW 331

  Fly  1279 VSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVL-------KDPP 1335
            |.:|.......|...::....||..||:||||||..: ||.|.:||:..:|.:|       :..|
Zfish   332 VGFDDQKSYETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLIGHLHTLLNISNTEFRHLP 396

  Fly  1336 SLMEIPGP------IETTP 1348
            ..::..|.      :.|||
Zfish   397 KTIKSGGASATGNIVTTTP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:426342
CBM_14 875..918 CDD:426342
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 143/376 (38%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
chia.4NP_956740.1 GH18_chitolectin_chitotriosidase 25..381 CDD:119351 142/370 (38%)
ChtBD2 425..473 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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