DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and chia.6

DIOPT Version :10

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio


Alignment Length:510 Identity:174/510 - (34%)
Similarity:257/510 - (50%) Gaps:100/510 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1410 KIICYFTNWAWYRQGGGKFLPEDIDSDLCTHIIYGFAVLSRDN-LTIQPHDSWADLDNKFYERIV 1473
            :::||||||:.||...||::|.::|..||||:||.|::::.:| ||..   .|.  |...|:...
Zfish    22 QLVCYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTY---EWN--DETLYQSFN 81

  Fly  1474 AYRKK--GAKVTVAIGGWNDSAGDKYSRLVRNPEARSRFIRNVLDFIEEYNFDGLDLDWEYPVCW 1536
            ..::.  ..|..:|:||||... .::|.:|..|:.|..||::.:.|:..:.|||||||||||   
Zfish    82 GLKQSNPNLKTLLAVGGWNFGT-TQFSSMVSTPQNRQTFIQSSITFLRTHGFDGLDLDWEYP--- 142

  Fly  1537 QVDCKKGTAEEKIGFSALVRELFYAFQ--------PRGLILSAAVSPNKKVIDAGYEVAELSHYF 1593
              ..:....|:|..|:.|.:||..|:|        || |:|:|||:..|..||||||:||::.|.
Zfish   143 --GSRGSPPEDKQRFTLLCKELVEAYQAESAATGRPR-LMLTAAVAAGKGNIDAGYEIAEIAKYL 204

  Fly  1594 SWISVMAYDYHGQWDKKTGHVAPMYSHPEGTAN------FNANFSMNYWISMGADRRKLVMGIPL 1652
            .:|::|.||:||.|:..|||.:|:|   .|:.:      :|.:|:|.||...||...||.||...
Zfish   205 DFINIMTYDFHGSWESVTGHNSPLY---RGSGDIGDKIYYNTDFAMTYWRDQGAPVEKLRMGFAA 266

  Fly  1653 YGQSFSLAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNVVRDTKGRIGPFAYH 1717
            ||::|.|:.... .:.||..|...||..||..||.:|||||..::......:.|.|   .|:|..
Zfish   267 YGRTFRLSSAVS-GVGAPASGAASAGTYTREAGFWSYYEICTFLKQATVQQIVDQK---VPYATK 327

  Fly  1718 GDQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDDFK-NVCECESYPLLKAINRVLRGFGGPQ 1781
            |.:||.||::...:.|.:|:|..|.|||.:||||||||. ..|....|||:..:..:|.      
Zfish   328 GQEWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIGQLRTLLN------ 386

  Fly  1782 PKCLLEN-------PKSTMKPN-------------IKPPFRPTINAPSGPNLDSPTQNVSLNVLS 1826
                :.|       |.:|:||:             .:||..||  ||||.:.             
Zfish   387 ----INNTEFPYNPPSTTVKPSGRPTRASATVPYATRPPVVPT--APSGSDF------------- 432

  Fly  1827 IKCHSKNYLAHEW--DCTKYYICEHG-TYVERSCPLGLQWNKTY-------CDWP 1871
              |..|....:|:  |...|..|.:| |:::| ||.     ||.       |:||
Zfish   433 --CTGKLEGIYEYPADSMIYIHCANGRTFIQR-CPA-----KTVFDPDCKCCNWP 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:426342
CBM_14 875..918 CDD:426342
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 144/380 (38%)
ChtBD2 1834..1871 CDD:214696 12/46 (26%)
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
chia.6NP_955897.2 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 144/380 (38%)
CBM_14 433..480 CDD:426342 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.

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