DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and Chit1

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:502 Identity:180/502 - (35%)
Similarity:261/502 - (51%) Gaps:93/502 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   966 KVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADVENN---FYTR 1027
            |:.|||||||.||.|..||.|.|::..|||||||.||.|:..::        :.||.|   ||..
  Rat    23 KLFCYFTNWAQYRSGAARFLPRDVDPNLCTHVIYAFAGLNNHQV--------STVEPNDELFYQE 79

  Fly  1028 VTSLKSKG--IKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPV 1090
            :.|||.:.  :|..||:|||:... .|::.:|.:...|..||..||.|:..:||:||||||||| 
  Rat    80 LNSLKKRNPKLKTLLAVGGWSFGT-QKFTDMVATASTRQTFVNSALSFLRTHGFDGLDLDWEYP- 142

  Fly  1091 CWQTECNKGS-TEEKDGFTAWVQELSEAFRPRG-------LMLSTAVSPSRKIIDAGYDIPQLSR 1147
                 .::|| ..:|:.|||.:|:|::||:...       |:|:.||...|..:||||::.::.:
  Rat   143 -----GSRGSPAVDKERFTALIQDLAKAFQEEARASGKSRLLLTAAVPTGRGHVDAGYEVDKIVQ 202

  Fly  1148 YFDWIAVMTYDFHGHWDKKTGHVAPLYHHPDD---DFEYFNVNYSINYWMEKGAPSQKLVMGIPL 1209
            ..|:|.:|.||||..|||.|||.:|||....:   |.|. ||:.::..|::||.|:.||::|:|.
  Rat   203 SLDFINLMAYDFHSSWDKTTGHNSPLYKRQGETGKDAEK-NVDAAVTLWLQKGTPASKLMLGMPA 266

  Fly  1210 YGQSFTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRMGPYAYK 1274
            ||:||||.:::.||:.|.|..||..|.:|:..|.|.|:|:|   :.:|.|.:.|:   ..||..:
  Rat   267 YGRSFTLASSSDSGVGAPATGPGAPGPYTKEKGILVYFEVC---SWKGKQRIEDQ---KVPYVSQ 325

  Fly  1275 GTQWVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVL---KDPP 1335
            |.|||.:|..:..|.|:..|:...|||.|||.||.||||.. |..|.:||:..:|..|   ..||
  Rat   326 GNQWVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQELSLSSGPP 390

  Fly  1336 SL--MEIPGPIETTPTEYPGMEEEIHESNGEGPEVQPIEAVMQTCENEGEEHEGILDPNHVLEEE 1398
            ..  .|:|||.:  |:|               ||..|...:...|:.:.:.    |.||      
  Rat   391 RSPEQEVPGPHQ--PSE---------------PEQGPSPGLDDFCQGKADG----LYPN------ 428

  Fly  1399 NIEATEMATEFKIICYFTNWAWYRQGGGKFLPED-------IDSDLC 1438
               .||.:            ::|..|||:.....       |||..|
  Rat   429 ---PTEKS------------SFYSCGGGRLFQHSCPPGLVFIDSCKC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 145/359 (40%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 153/380 (40%)
Glyco_18 1410..1753 CDD:214753 8/36 (22%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 8/35 (23%)
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 153/380 (40%)
ChtBD2 416..463 CDD:214696 14/70 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350349
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9066
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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