DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and cht-4

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:386 Identity:102/386 - (26%)
Similarity:156/386 - (40%) Gaps:76/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   967 VICYFTNWAWYRKGIGRFTPDDIN---TELCTHVIYGFAVLDYSELVLRTHDS--------WADV 1020
            |.||:.           ....||:   ..||||:|          |:...|.|        ..|:
 Worm    20 VACYYI-----------LNQPDISKVPKNLCTHII----------LINSAHVSEDGRLQGFEQDL 63

  Fly  1021 ENNFYTRVTSLKSKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLD 1085
            |:     .:.|....|::.:::...|.|    :|.|..:......|.....:.::||...|:|:|
 Worm    64 EH-----FSELFDGKIELFVSITSSNPS----FSFLTSNTTLMHNFSSTVTQVLQKYRLNGVDID 119

  Fly  1086 WEYPVCWQTECNKGSTEEKDGFTAWVQELSEAFRPRGLMLSTAVSPSRKIIDAGYDIPQLSRYFD 1150
            ||:|| |..:..|   .:|..|..:::.|....:|..|.||.|||....|....||:..|..|.|
 Worm   120 WEFPV-WSRDAQK---SDKAHFATFLRILKSHLKPADLKLSVAVSGPPTISRKAYDVDALKMYAD 180

  Fly  1151 WIAVMTYDFH---GHWDKKTGHVAPLYHHP----DDDFEYFNVNYSINYWMEKGAPSQKLVMGIP 1208
            .:.:|.||||   .:.:...|..|||  ||    .......|...|:..|.:.|.|......|||
 Worm   181 MVQIMNYDFHVFNRYSNPFVGFNAPL--HPMRAEISVLGEMNAEASMKTWYDLGLPRNISFFGIP 243

  Fly  1209 LYGQSFT-----LENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVHDEFGRM 1268
            .|.::|.     |....|..:.|:.       |.|...      ::|.......:..|.:...: 
 Worm   244 TYARAFQLLTHYLHKPYSPAIRARP-------EITNLP------DVCIFAQSGYYTTVWNHHAQ- 294

  Fly  1269 GPYAYKGTQ--WVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNRCGNGVHPLLTEI 1327
            .||.| |..  ||||::...:..|....|.|::||.||:::..||...:||:|.:||||:|
 Worm   295 APYLY-GDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLLTKI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 92/367 (25%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 102/386 (26%)
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 99/365 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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