DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht10 and chil-18

DIOPT Version :10

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_496024.2 Gene:chil-18 / 187735 WormBaseID:WBGene00011161 Length:429 Species:Caenorhabditis elegans


Alignment Length:402 Identity:90/402 - (22%)
Similarity:168/402 - (41%) Gaps:83/402 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1401 EATEMATEFKIICYFTNWAW---YRQGGGKFLPEDIDSDLCTHIIYGFAVLSRDNLTIQPHDSWA 1462
            :.|:...:.:::.|::.|..   .|...||.          ||.::.|..:          ||..
 Worm    61 DLTKSPCKKRVVGYYSEWEGTEITRSQLGKL----------THAVFAFIHM----------DSEG 105

  Fly  1463 DLDNKF-----YERI---VAYRKKGAKVTVAIGGWNDSAGDKYSRLVRNPEARSRFIRNVLDFIE 1519
            .|..|.     :|::   |.......||.::|||  |...:.:..::.:.|.:|.||.::..||.
 Worm   106 KLQFKTNQKERFEKLKTAVKNANSDTKVMISIGG--DHNSENFGSVLSDSEKKSMFIDSIARFIR 168

  Fly  1520 EYNFDGLDLDWEYPVCWQVDCKKGTAE-EKIGFSALVRELFYAFQP-RGLILSAAVSPNKKVIDA 1582
            ::...|:|:.|::         .|.:| |...|.:.:::|....:. |...:.:.|:|..| :|.
 Worm   169 QHKIHGVDIYWKW---------LGNSETEHHDFPSFLKDLKEKLKTVRDDSIISIVAPQAK-MDR 223

  Fly  1583 ---GYEVAELSHYFSWISVMAYDYHG----QWDKKTGHVAPMYSHPEGTANFNANFSMNYWISMG 1640
               ||:..:...|..:::|.:.||:|    ||...||..||:|.......:||.:.:|.|:..|.
 Worm   224 RHDGYKFDDFMEYIDFVNVFSMDYYGPWPNQWGTPTGPSAPLYGGIGVKKHFNVDSTMKYYTCMT 288

  Fly  1641 ADRRKLVMGIPLYGQSFSLAETTKHQLNAPT--------YGGGEAGEATRARGFLAY--YEICLK 1695
            .|..|..|.||.|   ..|.:..|..:::.|        ..|...|.:..:|..:.:  :|:...
 Worm   289 EDPSKFNMVIPFY---VRLWKNVKEPISSGTEVFRRADLKNGAAVGNSYMSRWTVDHEGWELTPA 350

  Fly  1696 IRHHRWNVVRDTKGRIGPFAYHGD--QWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDDFKNV 1758
            :    |:.|..|     |:.::.:  .:::|::...|..|..|.....|||..|..:|.|:    
 Worm   351 L----WDDVTKT-----PYVWNQETGNFLTFENKKSIEAKLAYAIEHNLGGVWIHLVDKDN---- 402

  Fly  1759 CECESYPLLKAI 1770
               |:..||:|:
 Worm   403 ---ENEELLRAV 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:426342
CBM_14 875..918 CDD:426342
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 89/392 (23%)
ChtBD2 1834..1871 CDD:214696
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
chil-18NP_496024.2 Glyco_18 70..401 CDD:214753 84/374 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.