DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and R02F2.4

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_498171.1 Gene:R02F2.4 / 175755 WormBaseID:WBGene00019833 Length:431 Species:Caenorhabditis elegans


Alignment Length:330 Identity:75/330 - (22%)
Similarity:116/330 - (35%) Gaps:83/330 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 SSDGSGGLGQNHDHTTSLPSGQISSSPVSTTITSTFP--WWSSTTKRPREPTKTTAQPTHTTILI 679
            |.||||....:.:.|....||:.|...:...:..:..  .:||.|.........:..|...:...
 Worm    87 SGDGSGESSGDEEITFGDSSGESSGDELLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCST 151

  Fly   680 PAGINPVVQPSNCK-------------SGEFFADSNN-----C-NAYYHCFFAGELQQQFCPSGL 725
            |.    :..|:|.|             |||:.....|     | |.::.| ..|...::.||:.|
 Worm   152 PL----IYDPTNKKCSWKGMIDECSQVSGEYCESDGNISKSECSNVFFSC-SEGIAHRRNCPANL 211

  Fly   726 HWNNEAKGCDWPSSA-QCSLKLDQHLSTSYPNPIQTSKKPETTLKPNKKPSEISTHHQVNSTSSR 789
            .:|.....||||.:. .||.|               |:||:                        
 Worm   212 VFNPAISSCDWPKNVMDCSEK---------------SEKPQ------------------------ 237

  Fly   790 PQYMRPTILECTEGD-YYPHRNC-RKYYICVNKALVPSECGGDLHWDGIKKLCDWPENV-QC-VT 850
                     .|.|.| |:....| ..:..|.|...:...|...|.:....::||:..|| :| :.
 Worm   238 ---------NCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE 293

  Fly   851 SKKYLKIIKSSSANEEDPCKGEKRVPYPGNCS-KYLFCLWNRLQASDCPPGLHYNERIGNCDWP- 913
            |..:::..|:|.|  ..||.......|..:|: :.|.|...|....:|||.|.:||....||:| 
 Worm   294 SSGFMENYKASEA--LTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPE 356

  Fly   914 AAAKC 918
            .:.||
 Worm   357 TSLKC 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696 11/45 (24%)
CBM_14 801..848 CDD:279884 12/49 (24%)
CBM_14 875..918 CDD:279884 14/44 (32%)
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
R02F2.4NP_498171.1 CBM_14 25..74 CDD:279884
ChtBD2 117..165 CDD:214696 8/51 (16%)
CBM_14 185..229 CDD:279884 12/44 (27%)
ChtBD2 240..283 CDD:214696 9/42 (21%)
CBM_14 310..361 CDD:279884 15/50 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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