DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht10 and CHIT1

DIOPT Version :9

Sequence 1:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster
Sequence 2:NP_003456.1 Gene:CHIT1 / 1118 HGNCID:1936 Length:466 Species:Homo sapiens


Alignment Length:482 Identity:173/482 - (35%)
Similarity:254/482 - (52%) Gaps:60/482 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1410 KIICYFTNWAWYRQGGGKFLPEDIDSDLCTHIIYGFAVLSRDNLTIQPHDSWADLDNKFYERIVA 1474
            |::|||||||.||||..:|||:|:|..||||:||.||.::...|:.   ..|.  |...|:....
Human    23 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLST---TEWN--DETLYQEFNG 82

  Fly  1475 YRKKGAKV--TVAIGGWNDSAGDKYSRLVRNPEARSRFIRNVLDFIEEYNFDGLDLDWEYPVCWQ 1537
            .:|...|:  .:||||||... .|::.:|.....|..|:.:.:.|:.:|:|||||||||||    
Human    83 LKKMNPKLKTLLAIGGWNFGT-QKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYP---- 142

  Fly  1538 VDCKKGTAEEKIGFSALVRELFYAFQPRG-------LILSAAVSPNKKVIDAGYEVAELSHYFSW 1595
             ..:...|.:|..|:.||::|..|||...       |:|||||...:..:||||||.:::....:
Human   143 -GSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDF 206

  Fly  1596 ISVMAYDYHGQWDKKTGHVAPMYSHPE---GTANFNANFSMNYWISMGADRRKLVMGIPLYGQSF 1657
            :::||||:||.|:|.|||.:|:|...|   ..|:.|.:.::..|:..|....||::|:|.||:||
Human   207 VNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSF 271

  Fly  1658 SLAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNVVRDTKGRIG----PFAYHG 1718
            :||.::..::.||..|.|..|..|:..|.|||||:|      .|...  ||.||.    |:.:..
Human   272 TLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVC------SWKGA--TKQRIQDQKVPYIFRD 328

  Fly  1719 DQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDDFKNV-CECESYPLLKAINRVLRGFGGPQP 1782
            :|||.||||...:.|..|:|..||||||:||||||||... |....|||::.:.:.|        
Human   329 NQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQEL-------- 385

  Fly  1783 KCLLENPKSTMKPNIKPPFRPTINAPSGPNLDSPTQNVSLNVLSIKCHSK--NYLAHEWDCTKYY 1845
             .|...|..|.:..:..|.:|: ....||   ||.|:..       |..|  ....:..:.:.:|
Human   386 -SLPYLPSGTPELEVPKPGQPS-EPEHGP---SPGQDTF-------CQGKADGLYPNPRERSSFY 438

  Fly  1846 ICEHGTYVERSCPLGLQWNKT--YCDW 1870
            .|..|...::|||.||.::.:  .|.|
Human   439 SCAAGRLFQQSCPTGLVFSNSCKCCTW 465

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753 142/358 (40%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 149/379 (39%)
ChtBD2 1834..1871 CDD:214696 10/39 (26%)
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
CHIT1NP_003456.1 Glyco_18 23..363 CDD:214753 142/358 (40%)
GH18_chitolectin_chitotriosidase 24..385 CDD:119351 149/379 (39%)