DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spf45 and GDH2

DIOPT Version :9

Sequence 1:NP_001036426.1 Gene:Spf45 / 3355114 FlyBaseID:FBgn0086683 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_010066.1 Gene:GDH2 / 851311 SGDID:S000002374 Length:1092 Species:Saccharomyces cerevisiae


Alignment Length:91 Identity:23/91 - (25%)
Similarity:35/91 - (38%) Gaps:34/91 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLYD-----GID-------TRARSSQ--IDGWSSGIKML--------QTQLA--------VKMAV 36
            |:||     .||       |:.|.::  .:|.|.|:.:|        ||.:|        :.:.:
Yeast   593 DIYDLNSKNVIDENYQLASTQQRKNKDIPEGGSKGVILLNPGLVEHDQTFVAFSQYVDAMIDILI 657

  Fly    37 KKPLMTPVVNLRSKRLADPEVTCFAP 62
            ..||....|||..|.    |:..|.|
Yeast   658 NDPLKENYVNLLPKE----EILFFGP 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spf45NP_001036426.1 G-patch 209..248 CDD:279867
RRM_UHM_SPF45 307..402 CDD:241091
GDH2NP_010066.1 Bac_GDH 1..1092 CDD:421780 23/91 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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