DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp and parp1

DIOPT Version :9

Sequence 1:NP_001104452.1 Gene:Parp / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001038407.1 Gene:parp1 / 560788 ZFINID:ZDB-GENE-030131-3955 Length:1013 Species:Danio rerio


Alignment Length:1017 Identity:423/1017 - (41%)
Similarity:616/1017 - (60%) Gaps:49/1017 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKVPNWFHKTCFFKNQRPSSVGDIQNIG 71
            |.||||::|||:||.||..|:||:||:|:||||...|.|||:|.|.:||:......|..||....
Zfish    10 YKAEYAKSGRASCKKCKDNIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWLRAAVQSPSDISGFT 74

  Fly    72 NLRFADQKELTDLVENIQEVISAQLGKKRSKAFNLALKDFGIEYAKSSRSTCRGCEQKINKDLVR 136
            :||:.||:::...:|: ......:.|:|.:......|.||.:|||||:||||:||:|||.||.:|
Zfish    75 DLRWDDQEKVKTAIES-GGATGGKGGQKGAAKGEKTLNDFAVEYAKSNRSTCKGCDQKIEKDQIR 138

  Fly   137 LRKTVYDTEVGMKYGGQPLWHHLECFAQLRSELGWFA--SGEDMPGFQSLADDDQAKVKNAIPPI 199
            :.|...|.| ..:.|....|:|..||...|.||.:..  |...:.||..|.|:|:.::|..:|.:
Zfish   139 VSKKTVDPE-KPQLGLIDRWYHTGCFVSRREELIFKPEYSAAQLKGFAVLRDEDKEELKKRLPAV 202

  Fly   200 KSEELPDTKRAKMELSDTNEEGEKK------QRLKDQNDAYFRFRDDIKNKMKKKDIDILLKFNN 258
            |||    .||...|:.....:.:||      |.||||:...:..:|.:|......|:..||..|:
Zfish   203 KSE----GKRKADEVDGGVSKKQKKEDEKLEQNLKDQSQLIWGIKDKLKKFCSINDMKELLIANS 263

  Fly   259 QQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCNKLLKEPTRSA 323
            |:..:|:: .:.|:.:|.:.||:::.|..|.. |.:.....|.|.|:.|.||||....:.|.|..
Zfish   264 QEVPSGES-NIVDRLSDCMAFGSLKPCETCKG-QLVFKSDAYYCTGDISAWTKCVFKTQTPDRKD 326

  Fly   324 CIVPKELKALYNFLNTVKEIPSTRIF-NNFPP------NKSTFSRSLLKTNKNNDVLVRPTIPRI 381
            .:.|||...: .||...|.....|:| .:.||      :.||.|.:...::.:.::...|.    
Zfish   327 WVTPKEFSEI-PFLKKFKFKRQDRVFPKDAPPAAATPSSGSTTSAATSVSSASKNLTEAPA---- 386

  Fly   382 SPPLYNLKFSIIGLKNQHK-ELRKRIENLGGKFEVKISENTIAIISTELEIQKKSTRMKFAEELG 445
            ..||..:|...:|..:::| :|:|.:|:||||.....|:..:. ||::.||:|.|.:|:...:.|
Zfish   387 DKPLTGMKLLAVGKLSKNKDDLKKFVEDLGGKITGTASKAALC-ISSKKEIEKMSKKMEEVRDAG 450

  Fly   446 IHIVPIEFLDFVEADTEGAIKYINSTCICSWGTDPKSRIP--KETTKSLNSNSIY---------- 498
            :.:|..:||..::...:...:.|:...|..||.:.|...|  ...|||..::|..          
Zfish   451 VRVVADDFLTDIKESGKALQELISLHAISPWGAEVKVEAPAAAAATKSTGAHSSKSTGKVKEEEG 515

  Fly   499 -TKSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDSNNKYSVVLGLTDIQRNKNSYYKVQLLKADK 562
             :||..:..|  ||.|.|||||||||:.|||...:...||..|||.||.|..|||||:|||:.|.
Zfish   516 GSKSKKMKLT--VKGGAAVDPDSGLENCAHVLEQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDV 578

  Fly   563 KEKYWIFRSWGRIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEI 627
            :::||:||||||:||.||.:||::|....||..||..:|.:||||.:.. .||.|...:.||:||
Zfish   579 QKRYWVFRSWGRVGTTIGGNKLDKFYDKNSAMDNFCGVYEEKTGNAWAS-SNFTKYPNKFYPLEI 642

  Fly   628 QYDDDQKLVKH--ESHFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQS 690
            .|..|::.||.  :|....|:||..||:||::|||::||.|.::||.||:.||||||||..||||
Zfish   643 DYGQDEEAVKKLTQSAGAKSQLEKPVQDLIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQS 707

  Fly   691 AYRVVKEIYNVLECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAEIEV 755
            ||.::.|:...:...|:.:.::|.:|||||||||:||::.|.|:.....|:...||||:|.:|||
Zfish   708 AYSLLSEVQQAVADSSSESLILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEV 772

  Fly   756 AYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFK 820
            |||:::....::..:|:|.:|.::||::..:||:|.|..::.||||||||:||.:|.|.:.::||
Zfish   773 AYSLLRGGVENNEKDPIDINYEKLKTKIEVVDKSSHEAQLILQYVKNTHAATHNTYTLDVEEIFK 837

  Fly   821 VSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSK 885
            :.|:||.:|::|||:|.||:|||||||.||:.||||.||||||||||.||||||||:||||||||
Zfish   838 IEREGEYQRYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVSK 902

  Fly   886 SANYCCTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGV 950
            |||||.|||.:..||:||.|||||:|.|...|.:|.||...|||..|.||:.||| ::.:..:||
Zfish   903 SANYCHTSQADPVGLILLGEVALGNMHELKKASHITKLPKGKHSVKGLGRSAPDP-RATVSLNGV 966

  Fly   951 EIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKY 992
            :||.|:.:......:||||||||||||:|||::||.::.|.|
Zfish   967 DIPLGKGMNTNIDDTSLLYNEYIVYDVSQVNLKYLLKIRFNY 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParpNP_001104452.1 PLN03123 6..992 CDD:215590 422/1015 (42%)
zf-PARP 10..83 CDD:279039 35/72 (49%)
zf-PARP 114..193 CDD:279039 34/80 (43%)
PADR1 270..322 CDD:285325 16/51 (31%)
BRCT 382..454 CDD:214602 22/72 (31%)
WGR_PARP1_like 526..629 CDD:153428 51/102 (50%)
parp_like 645..988 CDD:238717 185/342 (54%)
parp1NP_001038407.1 PLN03123 7..1009 CDD:215590 423/1017 (42%)
zf-PARP 13..85 CDD:279039 35/71 (49%)
zf-PARP 116..197 CDD:279039 34/81 (42%)
PADR1 274..325 CDD:285325 16/51 (31%)
BRCT 385..461 CDD:278934 25/80 (31%)
WGR_PARP1_like 542..644 CDD:153428 51/102 (50%)
parp_like 661..1005 CDD:238717 185/344 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575983
Domainoid 1 1.000 248 1.000 Domainoid score I2113
eggNOG 1 0.900 - - E1_KOG1037
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1222
Inparanoid 1 1.050 752 1.000 Inparanoid score I542
OMA 1 1.010 - - QHG56136
OrthoDB 1 1.010 - - D121455at33208
OrthoFinder 1 1.000 - - FOG0006410
OrthoInspector 1 1.000 - - oto38981
orthoMCL 1 0.900 - - OOG6_101236
Panther 1 1.100 - - LDO PTHR10459
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4711
SonicParanoid 1 1.000 - - X4674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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