DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp and Parp4

DIOPT Version :9

Sequence 1:NP_001104452.1 Gene:Parp / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001139450.2 Gene:Parp4 / 328417 MGIID:2685589 Length:1969 Species:Mus musculus


Alignment Length:617 Identity:130/617 - (21%)
Similarity:250/617 - (40%) Gaps:105/617 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 KNQHKELRKRIENLGGKFEVKISENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEAD 460
            :.|.|:|:..|:..||||...::.....:|....::..:           .|:..|:..|...|:
Mouse    20 RQQKKKLQTDIKENGGKFSFLLNPQCTHVIVDSADVLSR-----------CHLNSIQKNDVQIAN 73

  Fly   461 ---TEGAIKYINSTCICSWGTDPKSRIPKETTKSLNSNSIYTKSMPVSRTFKVKDGLAVDPDSG- 521
               .:.:::......:.::  ||.|..|.......:.:.:.::.:|...| ..|:...|...|. 
Mouse    74 PAFIQDSVRQRRLLDVRNY--DPLSPAPAAPPAERSRSEVQSEYLPSDNT-PEKENTEVTEVSAE 135

  Fly   522 -------LEDIAHVYVDSNNKY----SVVLGLTDIQRNKNSYYKV--QLLKADKKEKYWIFRSWG 573
                   |:|...|..:...|.    :||:.|...|..::..:.:  ..|.||:|.:.   .|.|
Mouse   136 NVEIPPFLQDFEVVKYNILEKVGGPETVVVELQSSQDPESCPFVITAHFLLADQKTRR---ESTG 197

  Fly   574 RIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVKH 638
            :             .|||.|...::....|.....:..:::|.....::...::|      .:..
Mouse   198 K-------------QTSEGAIEYYESYVEDLKRQGFLLQEHFTAEATQLASEKLQ------ALLL 243

  Fly   639 ESHFFTSKLEISVQNLIKLIFD--IDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNV 701
            |....:..|...|.:|:::|:.  :..:..||::        |:..:|.:.:..|..::..:...
Mouse   244 EEVISSGALSQEVSDLLEVIWTEALGHLENTLLK--------PVNSMSLNDVSKAEGILLLVKTA 300

  Fly   702 LECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVS 766
            |:.|.:..:|......||.|:||.........:....|.|||.|::..:..       :...::|
Mouse   301 LKNGDSPGQLQKTMAEFYRLLPHRHPASEEVNLRLLAQKEDLCQLVRDMVN-------VCETNLS 358

  Fly   767 DACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFK 831
            ....|....|..::.::..:|:|:||||.:.:.|...:.|   ...:.|:.:|:|.|..||..| 
Mouse   359 KPNPPSLAKYRALRCKIEHVDQNTEEFSRVRKEVLQNNRS---EQPVDILQIFRVGRVNEATEF- 419

  Fly   832 PFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYM------FGKGIYFADMVSKSANYC 890
             ..||.|.:||:|||.:.|.:||||.|| :.|..|...|..      .|.||||:|.:|.|..|.
Mouse   420 -LSKLGNVRLLFHGSPVRNILGILSRGL-LLPKVAEDRGVQRTDVGNLGSGIYFSDSLSTSIKYA 482

  Fly   891 CTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYG 955
            ...:.:.:.|:::.:||||        |.:|        .|.:..::.:....|....||    .
Mouse   483 HAGETDGSRLLVVCDVALG--------KCVN--------LFKKDFSLTEAPPGYDSVHGV----S 527

  Fly   956 ETITDEHLKSSLLYNEYIVYDVAQVNIQYLFR 987
            ||.:   :.:....:|::||...||.::|:.:
Mouse   528 ETTS---VPTDFQDDEFVVYKTNQVKMKYIVK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParpNP_001104452.1 PLN03123 6..992 CDD:215590 130/617 (21%)
zf-PARP 10..83 CDD:279039
zf-PARP 114..193 CDD:279039
PADR1 270..322 CDD:285325
BRCT 382..454 CDD:214602 11/57 (19%)
WGR_PARP1_like 526..629 CDD:153428 18/108 (17%)
parp_like 645..988 CDD:238717 86/351 (25%)
Parp4NP_001139450.2 BRCT 4..81 CDD:214602 13/71 (18%)
Nuclear localization signal. /evidence=ECO:0000255 19..25 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..132 8/42 (19%)
parp_like 244..557 CDD:238717 87/357 (24%)
PARP 371..559 CDD:279038 61/215 (28%)
VIT 616..724 CDD:285661
marine_srt_targ 629..1174 CDD:274782
VWA 870..1026 CDD:214621
Nuclear localization signal. /evidence=ECO:0000255 1230..1242
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1372..1608
Drf_FH1 1394..1608 CDD:283903
Interaction with the major vault protein. /evidence=ECO:0000250|UniProtKB:Q9UKK3 1808..1969
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1037
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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