DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Parp1 and Parp4

DIOPT Version :10

Sequence 1:NP_001104452.1 Gene:Parp1 / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_001139450.2 Gene:Parp4 / 328417 MGIID:2685589 Length:1969 Species:Mus musculus


Alignment Length:617 Identity:130/617 - (21%)
Similarity:250/617 - (40%) Gaps:105/617 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 KNQHKELRKRIENLGGKFEVKISENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEAD 460
            :.|.|:|:..|:..||||...::.....:|....::..:           .|:..|:..|...|:
Mouse    20 RQQKKKLQTDIKENGGKFSFLLNPQCTHVIVDSADVLSR-----------CHLNSIQKNDVQIAN 73

  Fly   461 ---TEGAIKYINSTCICSWGTDPKSRIPKETTKSLNSNSIYTKSMPVSRTFKVKDGLAVDPDSG- 521
               .:.:::......:.::  ||.|..|.......:.:.:.::.:|...| ..|:...|...|. 
Mouse    74 PAFIQDSVRQRRLLDVRNY--DPLSPAPAAPPAERSRSEVQSEYLPSDNT-PEKENTEVTEVSAE 135

  Fly   522 -------LEDIAHVYVDSNNKY----SVVLGLTDIQRNKNSYYKV--QLLKADKKEKYWIFRSWG 573
                   |:|...|..:...|.    :||:.|...|..::..:.:  ..|.||:|.:.   .|.|
Mouse   136 NVEIPPFLQDFEVVKYNILEKVGGPETVVVELQSSQDPESCPFVITAHFLLADQKTRR---ESTG 197

  Fly   574 RIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVKH 638
            :             .|||.|...::....|.....:..:::|.....::...::|      .:..
Mouse   198 K-------------QTSEGAIEYYESYVEDLKRQGFLLQEHFTAEATQLASEKLQ------ALLL 243

  Fly   639 ESHFFTSKLEISVQNLIKLIFD--IDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNV 701
            |....:..|...|.:|:::|:.  :..:..||::        |:..:|.:.:..|..::..:...
Mouse   244 EEVISSGALSQEVSDLLEVIWTEALGHLENTLLK--------PVNSMSLNDVSKAEGILLLVKTA 300

  Fly   702 LECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVS 766
            |:.|.:..:|......||.|:||.........:....|.|||.|::..:..       :...::|
Mouse   301 LKNGDSPGQLQKTMAEFYRLLPHRHPASEEVNLRLLAQKEDLCQLVRDMVN-------VCETNLS 358

  Fly   767 DACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFK 831
            ....|....|..::.::..:|:|:||||.:.:.|...:.|   ...:.|:.:|:|.|..||..| 
Mouse   359 KPNPPSLAKYRALRCKIEHVDQNTEEFSRVRKEVLQNNRS---EQPVDILQIFRVGRVNEATEF- 419

  Fly   832 PFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYM------FGKGIYFADMVSKSANYC 890
             ..||.|.:||:|||.:.|.:||||.|| :.|..|...|..      .|.||||:|.:|.|..|.
Mouse   420 -LSKLGNVRLLFHGSPVRNILGILSRGL-LLPKVAEDRGVQRTDVGNLGSGIYFSDSLSTSIKYA 482

  Fly   891 CTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYG 955
            ...:.:.:.|:::.:||||        |.:|        .|.:..::.:....|....||    .
Mouse   483 HAGETDGSRLLVVCDVALG--------KCVN--------LFKKDFSLTEAPPGYDSVHGV----S 527

  Fly   956 ETITDEHLKSSLLYNEYIVYDVAQVNIQYLFR 987
            ||.:   :.:....:|::||...||.::|:.:
Mouse   528 ETTS---VPTDFQDDEFVVYKTNQVKMKYIVK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Parp1NP_001104452.1 PLN03123 6..992 CDD:215590 130/617 (21%)
Parp4NP_001139450.2 BRCT 5..88 CDD:469589 13/78 (17%)
Nuclear localization signal. /evidence=ECO:0000255 19..25 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..132 8/42 (19%)
parp_like 244..557 CDD:238717 87/357 (24%)
VIT 616..726 CDD:462492
ViaA <847..1011 CDD:441973
Nuclear localization signal. /evidence=ECO:0000255 1230..1242
Drf_FH1 1372..1618 CDD:461881
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1372..1608
Interaction with the major vault protein. /evidence=ECO:0000250|UniProtKB:Q9UKK3 1808..1969
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.