DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp1 and Parp1

DIOPT Version :10

Sequence 1:NP_001104452.1 Gene:Parp1 / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:NP_037195.1 Gene:Parp1 / 25591 RGDID:2053 Length:1014 Species:Rattus norvegicus


Alignment Length:1055 Identity:424/1055 - (40%)
Similarity:620/1055 - (58%) Gaps:123/1055 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKVPNWFHKTCFFK----NQRPSSVGDI 67
            |..|||::|||:||.|..:|.||:||:|:||||...|.|||:|:|.:||:|    .::|.:  ::
  Rat     9 YRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRQPDT--EV 71

  Fly    68 QNIGNLRFADQKELTDLVENIQEVISAQLGKKRSKAFNLA--------------LKDFGIEYAKS 118
            .....||:.||:::                ||.::|..:|              |.||..|||||
  Rat    72 DGFSELRWDDQQKV----------------KKTAEAGGVAGKGQHGGGGKAEKTLGDFAAEYAKS 120

  Fly   119 SRSTCRGCEQKINKDLVRLRKTVYDTE---VGMKYGGQPLWHHLECFAQLRSELGWFA--SGEDM 178
            :||||:||.:||.|..:||.|.:.|.|   :||    ...|:|..||.:.|.|||:..  |...:
  Rat   121 NRSTCKGCMEKIEKGQMRLSKKMLDPEKPQLGM----IDRWYHPTCFVKNRDELGFRPEYSASQL 181

  Fly   179 PGFQSLADDDQAKVKNAIPPIKSEELPDTKRAKMELSDTNEEGEKKQR-------------LKDQ 230
            .||..|:.:|:..:|..:|.:|||    .||...|:...:|..:||.:             ||.|
  Rat   182 KGFSLLSAEDKEALKKQLPAVKSE----GKRKCDEVDGIDEVAKKKSKKGKDKESSKLEKALKAQ 242

  Fly   231 NDAYFRFRDDIKNKMKKKDIDILLKFNNQQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFIV 295
            |:..:..:|::|......|:..||.||.||..:|:: .:.|:.||.:.|||:..|.|| |.|.:.
  Rat   243 NELVWNIKDELKKACSTNDLKELLIFNQQQVPSGES-AILDRVADGMAFGALLPCKEC-SGQLVF 305

  Fly   296 NKSGYICNGNHSEWTKCNKLLKEPTRSACIVPKELKALYNFLNTVKEIPSTRIFNNFPPNKSTFS 360
            ....|.|.|:.:.||||....:.|:|...:.|||.:.: ::|..:|.....|:   |||..|.  
  Rat   306 KSDAYYCTGDVTAWTKCMVKTQNPSRKEWVTPKEFREI-SYLKKLKIKKQDRL---FPPESSA-- 364

  Fly   361 RSLLKTNKNNDVLVRPTIPRIS---------------PPLYNLKFSIIGLKNQHK-ELRKRIENL 409
                         ..|..|.:|               .||.|:|...:|..:|:| |.:..||.|
  Rat   365 -------------PAPPAPPVSITSAPTAVNSSAPADKPLSNMKILTLGKLSQNKDEAKAMIEKL 416

  Fly   410 GGKFEVKISENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADTEGAIKYINSTCIC 474
            |||.....::.::. |||:.|::|.|.:|:..:...:.:|..:||..|.|..:...:.:::..:.
  Rat   417 GGKLTGSANKASLC-ISTKKEVEKMSKKMEEVKAANVRVVCEDFLQDVSASAKSLQELLSAHSLS 480

  Fly   475 SWGTD----------PKSRIPKETTKSLNSNSIYTKSMPVSRTFK-----VKDGLAVDPDSGLED 524
            |||.:          ||.:....:.||..:    .|...|:::.|     :|.|.|||||||||.
  Rat   481 SWGAEVKVEPGEVVVPKGKSAAPSKKSKGA----VKEEGVNKSEKRMKLTLKGGAAVDPDSGLEH 541

  Fly   525 IAHVYVDSNNKYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFDT 589
            .|||.......:|..|||.||.:..|||||:|||::||:.:|||||||||:||.||::|||:..:
  Rat   542 SAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLESDKESRYWIFRSWGRVGTVIGSNKLEQMPS 606

  Fly   590 SESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVKH--ESHFFTSKLEISVQ 652
            .|.|..:|.::|.:||||.:..: ||.|...:.||:||.|..|::.||.  ......|||...||
  Rat   607 KEDAVEHFMKLYEEKTGNAWHSK-NFTKYPKKFYPLEIDYGQDEEAVKKLAVKPGTKSKLPKPVQ 670

  Fly   653 NLIKLIFDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNR 717
            .|:.:|||::||.|.|:|:.||:.||||||||..|||:||.::.|:...:..||:.::::|.:||
  Rat   671 ELVGMIFDVESMKKALVEYEIDLQKMPLGKLSRRQIQAAYSILSEVQQAVSQGSSESQILDLSNR 735

  Fly   718 FYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQ 782
            |||||||:||::.|.|:.....::...:|||:|.:||||||:::......:.:|:|.:|.::||.
  Rat   736 FYTLIPHDFGMKKPPLLNNTDSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTD 800

  Fly   783 LVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSR 847
            :..:|::|||..::.:|||||||:||.:|||:::|:||:.|:||::|:|||::||||:|||||||
  Rat   801 IKVVDRDSEEAEVIRKYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSR 865

  Fly   848 LTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMM 912
            .|||.||||.||||||||||.||||||||||||||||||||||.|||.:..||:||.|||||:|.
  Rat   866 TTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMY 930

  Fly   913 ECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDV 977
            |...|.:|:||...|||..|.|:|.|||:.| |..||||:|.|..|......:.||||||||||:
  Rat   931 ELKHASHISKLPKGKHSVKGLGKTAPDPSAS-ITLDGVEVPLGTGIPSGVNDTCLLYNEYIVYDI 994

  Fly   978 AQVNIQYLFRMEFKY 992
            ||||::||.:::|.:
  Rat   995 AQVNLKYLLKLKFNF 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Parp1NP_001104452.1 PLN03123 6..992 CDD:215590 424/1053 (40%)
Parp1NP_037195.1 PLN03123 9..1010 CDD:215590 424/1055 (40%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P09874 207..209 0/1 (0%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P09874 221..226 1/4 (25%)
Zinc ribbon. /evidence=ECO:0000255|PROSITE-ProRule:PRU01351 291..333 14/41 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 357..387 4/44 (9%)
Automodification domain. /evidence=ECO:0000250|UniProtKB:P09874 374..524 47/180 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..519 6/27 (22%)

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