DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp and PARP4

DIOPT Version :9

Sequence 1:NP_001104452.1 Gene:Parp / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_011533233.1 Gene:PARP4 / 143 HGNCID:271 Length:1771 Species:Homo sapiens


Alignment Length:414 Identity:93/414 - (22%)
Similarity:169/414 - (40%) Gaps:72/414 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 TSESAKRNFKEIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQN 653
            |||.|...|:....:.....:..|::|.....::...::|      .:..|....:|.|...|.:
Human   254 TSEDASEYFENYIEELKKQGFLLREHFTPEATQLASEQLQ------ALLLEEVMNSSTLSQEVSD 312

  Fly   654 LIKLIFDIDSMNKTLMEFHID-MDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNR 717
            |:::|: .:::.      |:: |...|:.::|.:.:..|..::..:...|:.|....:|......
Human   313 LVEMIW-AEALG------HLEHMLLKPVNRISLNDVSKAEGILLLVKAALKNGETAEQLQKMMTE 370

  Fly   718 FYTLIPH--------NFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDN 774
            ||.||||        |.|: |....:..|.|.|:..:.::              ::|....|...
Human   371 FYRLIPHKGTMPKEVNLGL-LAKKADLCQLIRDMVNVCET--------------NLSKPNPPSLA 420

  Fly   775 HYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNR 839
            .|..::.::..:::|:|||..:.:.|...|   |....:.::.:|:|.|..|...|  ..||.|.
Human   421 KYRALRCKIEHVEQNTEEFLRVRKEVLQNH---HSKSPVDVLQIFRVGRVNETTEF--LSKLGNV 480

  Fly   840 KLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYM------FGKGIYFADMVSKSANYCCTSQQNST 898
            :.|.|||.:.|.||||..|| :.|......|..      .|.||||:|.:|.|..|....:.:.|
Human   481 RPLLHGSPVQNIVGILCRGL-LLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGT 544

  Fly   899 GLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHL 963
            .|:|:.:||||..|:.....:                ::.:....|....||......|...|. 
Human   545 RLLLICDVALGKCMDLHEKDF----------------SLTEAPPGYDSVHGVSQTASVTTDFED- 592

  Fly   964 KSSLLYNEYIVYDVAQVNIQYLFR 987
                  :|::||...||.::|:.:
Human   593 ------DEFVVYKTNQVKMKYIIK 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParpNP_001104452.1 PLN03123 6..992 CDD:215590 93/414 (22%)
zf-PARP 10..83 CDD:279039
zf-PARP 114..193 CDD:279039
PADR1 270..322 CDD:285325
BRCT 382..454 CDD:214602
WGR_PARP1_like 526..629 CDD:153428 7/39 (18%)
parp_like 645..988 CDD:238717 84/358 (23%)
PARP4XP_011533233.1 BRCT <91..135 CDD:381769
parp_like 298..612 CDD:238717 85/364 (23%)
VIT 670..780 CDD:378008
marine_srt_targ 683..1231 CDD:274782
MISS 1355..>1509 CDD:318115
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1037
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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