DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp and parp2

DIOPT Version :9

Sequence 1:NP_001104452.1 Gene:Parp / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_002934323.3 Gene:parp2 / 100495846 XenbaseID:XB-GENE-1001702 Length:742 Species:Xenopus tropicalis


Alignment Length:601 Identity:223/601 - (37%)
Similarity:341/601 - (56%) Gaps:33/601 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 ISENTIAIISTELEIQKKSTRMKFAEELGIHIVPIEFLDFVEADTEGAIKYINSTCICSWGTDP- 480
            ||.:....::.|...|.::..:..:.....:|:.:|.:....:.||...:.  ..|:....:.| 
 Frog   148 ISYDACTCVALEAGFQSEAKMVSVSLGGRPYIIDLETMVQKNSQTEHERQI--QRCLSGPSSAPQ 210

  Fly   481 -KSRIPKETTKSLNSNSIYT------KSMPVSRTFKVKDGLAVDPDSGLE-DIAHVYVDSNNKYS 537
             ||.|.....:|..|.|:..      ::....||..:|....|||:...: ..|||:.:.::.|.
 Frog   211 QKSTISAPAKRSRGSKSVINVEDESEENKEQVRTLVMKGKAPVDPECSTKLGRAHVFCEGDDVYD 275

  Fly   538 VVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFDTSESAKRNFKEIYA 602
            |:|..|::|.|.|.||.:|||:.|....:.::..|||:|....||.:......:.||..|::.:.
 Frog   276 VMLNQTNLQFNNNKYYLIQLLEDDGVRNFSVWMRWGRVGKVGQNSLVCCGGDLQKAKDIFQKKFL 340

  Fly   603 DKTGNEYEQRDNFVKRTGRMYPIEIQYD----DDQKLVKHESHFFTSK----LEISVQNLIKLIF 659
            |||.|.:.:|..|.|..|:...:::.|:    ::::.||.||.....|    |::|:|.||:||.
 Frog   341 DKTKNLWTERAQFEKCPGKYDMLQMDYNATEQEEERAVKEESLADLPKPECQLDLSIQELIQLIC 405

  Fly   660 DIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNRFYTLIPH 724
            ::.:|.:|::|...|..|.|||||:..||::.|..::.|.|.::.......|::|.|.|||.|||
 Frog   406 NLKAMEETVLEMKFDTKKAPLGKLTVDQIRAGYCSLQRIENCIKKQKFGRDLLEACNEFYTRIPH 470

  Fly   725 NFGVQLPTLIETHQQIEDLR---QMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVAL 786
            :||::.|.||.|   :|||.   ::|::|.:|::|.. :.|.|::...:|:|..|.|:...:..|
 Frog   471 DFGLRTPPLIRT---LEDLTVKVRLLEALGDIQIAVK-LASMDLNSLEHPIDRQYRQLNCSIQPL 531

  Fly   787 DKNSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNF 851
            ||.|..|.::..|:::|||.||..|.:.::.||::.|.||...|:  ..|.||.||||||||||:
 Frog   532 DKTSSTFQLIDGYLQSTHAPTHNDYTMTLLQVFELQRMGEECSFR--ADLPNRMLLWHGSRLTNW 594

  Fly   852 VGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTS 916
            |||||.|||:||||||.|||||||||||||:.|||||||.:|:..:.|::||||||||:..|..:
 Frog   595 VGILSQGLRVAPPEAPVTGYMFGKGIYFADVSSKSANYCFSSRDKNVGVLLLSEVALGESNELLA 659

  Fly   917 AKY-INKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSS---LLYNEYIVYDV 977
            |.| ..|...:|||..|.||::||| |:.|..||..:|.|..|.......|   |.||||||||.
 Frog   660 ADYDAQKKLKSKHSTKGLGRSIPDP-KNSITHDGAVVPLGPLIDTGMTNDSDYTLNYNEYIVYDP 723

  Fly   978 AQVNIQYLFRMEFKYS 993
            .||.::||.::.|.||
 Frog   724 HQVRMKYLLQVHFNYS 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParpNP_001104452.1 PLN03123 6..992 CDD:215590 221/598 (37%)
zf-PARP 10..83 CDD:279039
zf-PARP 114..193 CDD:279039
PADR1 270..322 CDD:285325
BRCT 382..454 CDD:214602 6/36 (17%)
WGR_PARP1_like 526..629 CDD:153428 33/102 (32%)
parp_like 645..988 CDD:238717 160/353 (45%)
parp2XP_002934323.3 WWE 64..126 CDD:397111
WWE 136..208 CDD:128922 9/61 (15%)
PLN03124 224..738 CDD:215591 207/520 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D121455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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