DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Parp1 and parp1

DIOPT Version :10

Sequence 1:NP_001104452.1 Gene:Parp1 / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_031757916.1 Gene:parp1 / 100490557 XenbaseID:XB-GENE-974935 Length:1013 Species:Xenopus tropicalis


Alignment Length:1029 Identity:436/1029 - (42%)
Similarity:605/1029 - (58%) Gaps:75/1029 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YLAEYARTGRATCKGCKSTISKDTLRIAVMVQSAFHDAKVPNWFHKTCFFKNQRPSSVGDIQNIG 71
            |.||||::|||:||.|...|:|::||:|:||||...|.|||:|.|.:||:|..|..|.|||....
 Frog     9 YRAEYAKSGRASCKKCGDNIAKESLRLALMVQSPMFDGKVPHWHHYSCFWKRARVLSHGDIDGFT 73

  Fly    72 NLRFADQKELTDLVENIQEVISAQLGKKRSKAFNLALKDFGIEYAKSSRSTCRGCEQKINKDLVR 136
            .||:.||:::...:|.......|....|..|. .:.|.||.:|||||:||||:|||:||.|..:|
 Frog    74 ELRWDDQEKIKKAIETGGASAGAGGDAKGGKG-EMTLNDFAVEYAKSNRSTCKGCEKKIEKGQIR 137

  Fly   137 LRKTVYDTE---VGMKYGGQPLWHHLECFAQLRSELGWFA--SGEDMPGFQSLADDDQAKVKNAI 196
            :.|.:.|.|   :||    ...|:|.:||...|.|||:..  |...:..|..|..:|:..:|..:
 Frog   138 ISKKMVDVERPQLGM----IDRWYHSDCFVSCREELGFLPSYSASQLKAFSILKAEDKDALKAML 198

  Fly   197 PPIKSEELPDTKRAKMELSDTNEEGEKK-------------QRLKDQNDAYFRFRDDIKNKMKKK 248
            |.:|:|     .:.|.:..|.:..|.||             :.||:|.:..:..:|::|......
 Frog   199 PAVKNE-----GKRKADEVDASSAGTKKKLKKEKEKESKLEKLLKEQTELIWHIKDELKKVCSTN 258

  Fly   249 DIDILLKFNNQQPVTGDTEKLFDQTADLLTFGAIESCSECNSCQFIVNKSGYICNGNHSEWTKCN 313
            |:..||..|.||..:|:| .:.|:.:|.:.|||:..|.|| |.||:.....|.|.|:.|.||||.
 Frog   259 DLKELLIANKQQVPSGET-NILDRVSDGMAFGALLPCEEC-SGQFVFKSDAYYCTGDLSAWTKCV 321

  Fly   314 KLLKEPTRSACIVPKELKALYNFLNTVKEIPSTRIF------NNFPPNKSTFSRSLLKTNKNNDV 372
            ...:.|.|...:.|||.          .|:|..:.|      ..|||..:....|.....|....
 Frog   322 AKTQTPNRKDWVTPKEF----------HEVPYLKKFKFKRQDRAFPPCAAPTPISPPAAPKPAPT 376

  Fly   373 LVRPTIPRISPPLYNLKFSIIGLKNQHK-ELRKRIENLGGKFEVKISENTIAIISTELEIQKKST 436
             |..|:|. ..||.|.|..:||..:::| |::..||.||||......:.|:. |||:.|::|.|.
 Frog   377 -VEETVPE-GKPLTNAKVLVIGKLSKNKDEVKALIEGLGGKVTGSAHKATLC-ISTKKEVEKMSK 438

  Fly   437 RMKFAEELGIHIVPIEFLDFVEADTEGAIKYINSTCICSWGTDPKSRIPKETTKSLNSNSIYTKS 501
            :|:..:...:.:|..:||..||:. :...:.::...|.|||.:.|....:.|.|..:|.....||
 Frog   439 KMEDVKAANVRVVSDDFLKEVESG-KSVQELLSQYGISSWGAEVKQEAVQPTEKQPSSAPAAGKS 502

  Fly   502 MPVSRTFK------------VKDGLAVDPDSGLEDIAHVYVDSNNKYSVVLGLTDIQRNKNSYYK 554
            ....:..|            ||.|.|:||||||||..||.......:|..|||.||.|..|||||
 Frog   503 SGKVKEEKGSNKSEKKMKLTVKGGAAIDPDSGLEDSCHVLEKGGKIFSATLGLVDITRGTNSYYK 567

  Fly   555 VQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVKRT 619
            :||::.|:..:||:||||||:||.||::||||..:.|.|..:|..:|.:||||.:.. .||.|..
 Frog   568 LQLIEHDRNSRYWVFRSWGRVGTVIGSNKLEEMSSKEDAIDHFLNLYQEKTGNAWHS-PNFTKYP 631

  Fly   620 GRMYPIEIQYDDDQKLVKHES--HFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGK 682
            .:.||:||.|..::.:||..|  ....|||...||.|||||||::||.|.::||.||:.||||||
 Frog   632 NKFYPLEIDYGQEEDVVKKLSVGAGTKSKLAQPVQELIKLIFDVESMKKAMVEFEIDLQKMPLGK 696

  Fly   683 LSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQML 747
            ||..||||||.::.::...:...|:.|:|:|.:|:|||||||:||::.|.|:...:.|:...|||
 Frog   697 LSKRQIQSAYSILNQVQQAVSESSSEARLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQML 761

  Fly   748 DSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNSEEFSILSQYVKNTHASTHKSYD 812
            |:|.:||||||:::........:|:|..|.:|||.:..:||.|||..|:..|||||||.||.:||
 Frog   762 DNLLDIEVAYSLLRGGADDGEKDPIDVKYEKIKTDIKVVDKESEESRIIRDYVKNTHAETHNAYD 826

  Fly   813 LKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGI 877
            |:::::||:.|:||.:|:||||:||||:|||||||.|||.||||.||||||||||.|||||||||
 Frog   827 LEVLEIFKIEREGEYQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGI 891

  Fly   878 YFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKYINKLSNNKHSCFGRGRTMPDPTK 942
            |||||||||||||.....|..||:||.|||||:|.|..:|.:|.||...|||..|.|||.|||:.
 Frog   892 YFADMVSKSANYCNAMPGNPIGLILLGEVALGNMHELRAASHITKLPKGKHSVKGLGRTAPDPSA 956

  Fly   943 SYIRSDGVEIPYGE----TITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKY 992
            : ::.|||::|.|:    .|||    :||||||||||||||||::||.:::|.|
 Frog   957 T-VKLDGVDVPLGKGSATNITD----ASLLYNEYIVYDVAQVNLKYLLKLKFNY 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Parp1NP_001104452.1 PLN03123 6..992 CDD:215590 435/1027 (42%)
parp1XP_031757916.1 PLN03123 4..1006 CDD:215590 436/1029 (42%)

Return to query results.
Submit another query.