DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parp and parp2

DIOPT Version :9

Sequence 1:NP_001104452.1 Gene:Parp / 3355109 FlyBaseID:FBgn0010247 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_021334004.1 Gene:parp2 / 100007906 ZFINID:ZDB-GENE-031113-6 Length:649 Species:Danio rerio


Alignment Length:599 Identity:229/599 - (38%)
Similarity:350/599 - (58%) Gaps:42/599 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 VKISE-NTIAIISTELEIQK-KSTRMKFAEEL-------GIHIVPIEFLDFVEADTEGAIKYINS 470
            ||::: ||::....::.:|| ||..:.....|       |:    ::..:..|.:.|..:     
Zfish    70 VKMTQTNTVSKYKRKIRLQKVKSEDLNEGNALNGNKKATGV----VQIKEEKEEEEEQPV----- 125

  Fly   471 TCICSWGTDPKSRIPKETTKSLNSNSIYTKSMPVSRTFKVKDGLAVDPDSGLE-DIAHVYVDSNN 534
                    ..|.|....:.|:.....:..:...|.:|..:|....|||:...: ..||||.:..:
Zfish   126 --------SKKRRNEGRSQKANKDKPVVKEECEVVKTLVMKGKAPVDPECKAKLGKAHVYNEGAD 182

  Fly   535 KYSVVLGLTDIQRNKNSYYKVQLLKADKKEKYWIFRSWGRIGTNIGNSKLEEFDTS-ESAKRNFK 598
            .|.|:|..|::|.|.|.||.:|||:.|..:.|.::..|||:| .:|.:.|.....: ..||..||
Zfish   183 VYDVMLNQTNLQFNNNKYYLIQLLEDDSAKAYSVWLRWGRVG-KVGQNNLVSCGANLAQAKDTFK 246

  Fly   599 EIYADKTGNEYEQRDNFVKRTGRMYPIEIQYDDDQK-----LVKHESHFFTSKLEISVQNLIKLI 658
            :.:.|||.||:|.|.:|.|..|:...:.:.|..:.|     :|...:.....:|...||:|::||
Zfish   247 KKFFDKTKNEWEHRASFEKVAGKYDMVFMDYSTEDKGEEKAVVPSATQKKPCQLNSKVQSLLELI 311

  Fly   659 FDIDSMNKTLMEFHIDMDKMPLGKLSAHQIQSAYRVVKEIYNVLECGSNTAKLIDATNRFYTLIP 723
            .|:.:|.:.::|...|..|.|||||:|.||::.|..:|.|...|:...:..:|:||.|:|||.||
Zfish   312 CDLKAMEECVLEMKFDTKKAPLGKLTAEQIRAGYASLKRIEECLKKKGSNKELLDACNQFYTRIP 376

  Fly   724 HNFGVQLPTLIETHQQIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVALDK 788
            |:||::.|.:|.:.:::::...:|::|::|::|..:::|...||. :|||..|..:..||..||.
Zfish   377 HDFGLRTPPIIRSEEELKEKITLLETLSDIQIAVKMVQSNVKSDE-HPLDRQYHSLNCQLQPLDT 440

  Fly   789 NSEEFSILSQYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVG 853
            :|.|:.::.:|:|:|||.||..|.:.::|||.|.|:.|...|.  .:|.||.||||||||:|:||
Zfish   441 DSNEYKVIEKYLKSTHAPTHTDYTMTLLDVFAVEREVEKDNFN--SELQNRMLLWHGSRLSNWVG 503

  Fly   854 ILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAK 918
            |||.|||:||.|||.||||||||||||||.|||||||..||:|:.||:|||||||||..|...|.
Zfish   504 ILSQGLRVAPAEAPVTGYMFGKGIYFADMSSKSANYCFASQKNNQGLLLLSEVALGDSNELLDAD 568

  Fly   919 Y-INKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETI-TDEHLKS--SLLYNEYIVYDVAQ 979
            | .::|.:.|||..|.|:|.|||.|| :..:||.:|.|.:: |....|.  ||||||||||:.||
Zfish   569 YNADQLPSGKHSTKGLGQTAPDPKKS-VSLNGVTVPLGPSVKTGVGQKGGYSLLYNEYIVYNPAQ 632

  Fly   980 VNIQYLFRMEFKYS 993
            :.::||.|::|.:|
Zfish   633 IQMKYLLRVQFNFS 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ParpNP_001104452.1 PLN03123 6..992 CDD:215590 228/596 (38%)
zf-PARP 10..83 CDD:279039
zf-PARP 114..193 CDD:279039
PADR1 270..322 CDD:285325
BRCT 382..454 CDD:214602 10/47 (21%)
WGR_PARP1_like 526..629 CDD:153428 38/103 (37%)
parp_like 645..988 CDD:238717 164/346 (47%)
parp2XP_021334004.1 WWE 23..86 CDD:308464 4/15 (27%)
PARP_reg 98..645 CDD:332154 220/568 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1037
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D121455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101236
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.720

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