DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG41128 and AT1G72175

DIOPT Version :10

Sequence 1:NP_001015402.3 Gene:CG41128 / 3355108 FlyBaseID:FBgn0069923 Length:72 Species:Drosophila melanogaster
Sequence 2:NP_565037.1 Gene:AT1G72175 / 843549 AraportID:AT1G72175 Length:185 Species:Arabidopsis thaliana


Alignment Length:48 Identity:13/48 - (27%)
Similarity:21/48 - (43%) Gaps:9/48 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EEKICNRLDHCVSDVLIKGCGGV-----IIGSAVSFLILKRRAWPVWL 51
            |:.|.:|.|..|.:||    |.:     :.|...|.|:.:.:..|..|
plant    63 EDTIRDRNDATVKEVL----GNLETYNRLFGGRSSSLVQRMQDLPFLL 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41128NP_001015402.3 DUF543 <17..69 CDD:461300 10/40 (25%)
AT1G72175NP_565037.1 RING-HC_RNF113A_B 3..61 CDD:438201
DUF1232 130..>155 CDD:462011
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.