DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim17b and timm17b

DIOPT Version :10

Sequence 1:NP_001015401.1 Gene:Tim17b / 3355107 FlyBaseID:FBgn0263977 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001107065.1 Gene:timm17b / 562144 ZFINID:ZDB-GENE-081104-144 Length:167 Species:Danio rerio


Alignment Length:173 Identity:114/173 - (65%)
Similarity:129/173 - (74%) Gaps:6/173 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYAREPCPYRIVDDCGGAFAMGCIGGGVFQAIKGFRNAPSGLNRRLVGSIIAIKTRSPVIAGN 65
            ||||||||||:||||||||||.||.|||||||.:|||||||.|:..||.||..|::.|:|.|.|:
Zfish     1 MEEYAREPCPWRIVDDCGGAFTMGAIGGGVFQTVKGFRNAPVGVRHRLRGSANAVRVRAPQIGGS 65

  Fly    66 FAVWGGMFSTIDCTLVHFRKKEDPWNSIISGAATGGILAARNGVPAMAGSAIIGGVLLALIEGVG 130
            ||||||:||||||.||..|.||||||||.|||.||.|||||:|..||.|||::||:|||||||.|
Zfish    66 FAVWGGLFSTIDCGLVRLRGKEDPWNSITSGAMTGAILAARSGPLAMVGSAMMGGILLALIEGFG 130

  Fly   131 ILFTRISADQFKNPIPPAEDPVALGDPGRNFSFESASNRTQYQ 173
            ||.||.:|.||:|..|..|||..|  |.:    |.|....|||
Zfish   131 ILLTRYTAQQFQNSSPIVEDPKQL--PPK----EEARGYGQYQ 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17bNP_001015401.1 TIM22 1..155 CDD:470560 107/153 (70%)
timm17bNP_001107065.1 TIM22 1..167 CDD:470560 112/171 (65%)

Return to query results.
Submit another query.