DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim17b and Timm17a

DIOPT Version :9

Sequence 1:NP_001015401.1 Gene:Tim17b / 3355107 FlyBaseID:FBgn0263977 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_062224.1 Gene:Timm17a / 54311 RGDID:3862 Length:171 Species:Rattus norvegicus


Alignment Length:173 Identity:112/173 - (64%)
Similarity:127/173 - (73%) Gaps:2/173 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYAREPCPYRIVDDCGGAFAMGCIGGGVFQAIKGFRNAPSGLNRRLVGSIIAIKTRSPVIAGN 65
            ||||||||||:||||||||||.||.||||:|||.|||||:|.|:|.||.||:.|||||:|.:.|:
  Rat     1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGS 65

  Fly    66 FAVWGGMFSTIDCTLVHFRKKEDPWNSIISGAATGGILAARNGVPAMAGSAIIGGVLLALIEGVG 130
            ||||||:||||||.:|..|.||||||||.|||.||.|||||||..||.|||.:||:|||||||.|
  Rat    66 FAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAG 130

  Fly   131 ILFTRISADQFKNPIPPAEDPVALGDPGRNFSFESASNRTQYQ 173
            ||.||.::.||.|....|||...|  |..........:..|||
  Rat   131 ILLTRFASAQFPNGPQFAEDHSQL--PSSQLPSSPFGDYRQYQ 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17bNP_001015401.1 Tim17 1..155 CDD:295283 107/153 (70%)
Timm17aNP_062224.1 3a0801so1tim17 1..171 CDD:130053 110/171 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..171 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345900
Domainoid 1 1.000 168 1.000 Domainoid score I3719
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I3409
OMA 1 1.010 - - QHG54844
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm8951
orthoMCL 1 0.900 - - OOG6_101935
Panther 1 1.100 - - O PTHR10485
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X753
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.