DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b and Timm17b

DIOPT Version :9

Sequence 1:NP_001015401.1 Gene:Tim17b / 3355107 FlyBaseID:FBgn0263977 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_038955701.1 Gene:Timm17b / 317374 RGDID:1561744 Length:199 Species:Rattus norvegicus


Alignment Length:203 Identity:114/203 - (56%)
Similarity:130/203 - (64%) Gaps:36/203 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYAREPCPYRIVDDCGGAFAMGCIGGGVFQAIKGFRNAPSGLNRRLVGSIIAIKTRSPVIAGN 65
            ||||||||||:||||||||||.||.||||||||:|||||||.|:..|..|||.|::.|:|.|.|:
  Rat     1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAVKGFRNAPVGIRHRFRGSINAVRIRAPQIGGS 65

  Fly    66 FAVWGGMFSTIDCTLVHFRKKEDPWNSIISGAATGGILAARN----------------------- 107
            ||||||:||||||.||..|.||||||||.|||.||.:||||:                       
  Rat    66 FAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSECFQPLTPVLALFCLPFLSCVSF 130

  Fly   108 ----GVPAMAGSAIIGGVLLALIEGVGILFTRISADQFKNPIPPAEDPVAL----GDPGRNFSFE 164
                |..||.|||::||:|||||||||||.||.:|.||:|..|..|||..|    |.|...:   
  Rat   131 CLPGGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFRNAPPFLEDPNQLTPKEGAPAPGY--- 192

  Fly   165 SASNRTQY 172
              .|..||
  Rat   193 --PNYQQY 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17bNP_001015401.1 Tim17 1..155 CDD:295283 109/184 (59%)
Timm17bXP_038955701.1 Tim17 1..198 CDD:413300 112/201 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345894
Domainoid 1 1.000 168 1.000 Domainoid score I3719
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 225 1.000 Inparanoid score I3409
OMA 1 1.010 - - QHG54844
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm8951
orthoMCL 1 0.900 - - OOG6_101935
Panther 1 1.100 - - LDO PTHR10485
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X753
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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