DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg-2 and PEF1

DIOPT Version :9

Sequence 1:NP_001104459.2 Gene:Alg-2 / 3355106 FlyBaseID:FBgn0086378 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_011572.2 Gene:PEF1 / 852949 SGDID:S000003290 Length:335 Species:Saccharomyces cerevisiae


Alignment Length:178 Identity:53/178 - (29%)
Similarity:83/178 - (46%) Gaps:5/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NHDGMPDQQFLWDVFQRVDKDRSGHISADELQVALSNGTWSAFNPETIRLMIGMFDRENKGTVSF 68
            :.:.:.|.|....:|...|......::|:|||..|.|...|.|...::..:|.:|.....|||:.
Yeast   152 SREDVRDMQVATQLFHNHDVKGKNRLTAEELQNLLQNDDNSHFCISSVDALINLFGASRFGTVNQ 216

  Fly    69 KDFGALWKYVTDWQNCFRSFDRDNSGNIDKTELKTALTSFGY----RLSDHLIDVLLRKFDRFGR 129
            .:|.||:|.|..|:..:...|.:.|..|..:|...:|...||    .:|:...|......:|.|.
Yeast   217 AEFIALYKRVKSWRKVYVDNDINGSLTISVSEFHNSLQELGYLIPFEVSEKTFDQYAEFINRNGT 281

  Fly   130 GTIL-FDDFIQCCIVLYTLTTAFRQHDTDLDGIITIHYEQFLSMVFSL 176
            |..| ||.|::..:.|..||..||:.||:.:||.||.|:.|:.....|
Yeast   282 GKELKFDKFVEALVWLMRLTKLFRKFDTNQEGIATIQYKDFIDATLYL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg-2NP_001104459.2 EF-hand_7 16..71 CDD:290234 15/54 (28%)
EFh 16..71 CDD:238008 15/54 (28%)
EF-hand_7 82..139 CDD:290234 16/61 (26%)
EFh 85..139 CDD:238008 16/58 (28%)
PEF1NP_011572.2 EFh_PEF_Group_I 161..329 CDD:320055 50/167 (30%)
EF-hand motif 161..190 CDD:320055 8/28 (29%)
EF-hand motif 198..227 CDD:320055 9/28 (32%)
EF-hand motif 228..257 CDD:320055 6/28 (21%)
EF-hand motif 264..298 CDD:320055 9/33 (27%)
EF-hand motif 300..328 CDD:320055 12/27 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 80 1.000 Inparanoid score I1621
Isobase 1 0.950 - 0 Normalized mean entropy S1635
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000697
OrthoInspector 1 1.000 - - oto100350
orthoMCL 1 0.900 - - OOG6_100410
Panther 1 1.100 - - LDO PTHR46212
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.910

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