DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg-2 and capn2l

DIOPT Version :9

Sequence 1:NP_001104459.2 Gene:Alg-2 / 3355106 FlyBaseID:FBgn0086378 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001003485.1 Gene:capn2l / 445091 ZFINID:ZDB-GENE-050417-341 Length:700 Species:Danio rerio


Alignment Length:151 Identity:42/151 - (27%)
Similarity:78/151 - (51%) Gaps:8/151 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ISADELQVALSNG-------TWSAFNPETIRLMIGMFDRENKGTVSFKDFGALWKYVTDWQNCFR 86
            |||.|||..|:|.       ....|:.||.|.|:.:.|::..|.:...:|..||..:..:.:.:.
Zfish   548 ISAFELQKILNNVIAKRKEIKTDGFSLETCRNMVNLLDKDGTGKLGLLEFKILWTKIELFVDVYS 612

  Fly    87 SFDRDNSGNIDKTELKTALTSFGYRLSDHLIDVLLRKFDRFGRGTILFDDFIQCCIVLYTLTTAF 151
            ..|:|.||.:...|::.|:...|:.|::.|..:|:.::.. ...||.||:|:.|.|.|..:..||
Zfish   613 KNDKDQSGTMSSMEMREAVEKAGFSLNNALHQILVARYSE-SNLTIDFDNFVACLIRLECMFKAF 676

  Fly   152 RQHDTDLDGIITIHYEQFLSM 172
            :..|.|.:|.:.::..::|::
Zfish   677 KVLDKDKNGTVELNMIEWLNV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg-2NP_001104459.2 EF-hand_7 16..71 CDD:290234 15/48 (31%)
EFh 16..71 CDD:238008 15/48 (31%)
EF-hand_7 82..139 CDD:290234 15/56 (27%)
EFh 85..139 CDD:238008 15/53 (28%)
capn2lNP_001003485.1 Peptidase_C2 46..342 CDD:279042
Calpain_III 356..507 CDD:279416
EFh 577..631 CDD:298682 12/53 (23%)
FRQ1 604..>695 CDD:227455 23/91 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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