DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg-2 and Capn13

DIOPT Version :9

Sequence 1:NP_001104459.2 Gene:Alg-2 / 3355106 FlyBaseID:FBgn0086378 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001020304.1 Gene:Capn13 / 362701 RGDID:1562682 Length:668 Species:Rattus norvegicus


Alignment Length:163 Identity:39/163 - (23%)
Similarity:71/163 - (43%) Gaps:15/163 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DRSGHISADELQVALSNGTW------SAFNPETIRLMIGMFDRENKGTVSFKDFGALWKYVTDWQ 82
            |:...|.|.:|| :|.|..:      ..|:.:..:.::.:.|.:..|.:..::|..|...:...|
  Rat   510 DQGLDIDASQLQ-SLLNQEYLTGPPGDTFSLDQCQSIMALMDLKVNGRLDREEFARLQSRLIHCQ 573

  Fly    83 NCFRSFDRDNSGNIDKTELKTAL--TSF--GYRLSDHLIDVL-LRKFDRFGRGTILFDDFIQCCI 142
            :.|:...| :.|.:..::|...:  |.|  |..||..|:.:: ||..|..||  :.|...:...|
  Rat   574 HVFQHIQR-SQGVLRSSDLWEVIESTDFLSGVLLSKELLSLMTLRYSDSSGR--LSFPSLVCFLI 635

  Fly   143 VLYTLTTAFRQHDTDLDGIITIHYEQFLSMVFS 175
            .|.|::.|||....|...|.....|....:::|
  Rat   636 RLETMSKAFRNLSKDGKSIYLTEMEWMKLVMYS 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg-2NP_001104459.2 EF-hand_7 16..71 CDD:290234 10/52 (19%)
EFh 16..71 CDD:238008 10/52 (19%)
EF-hand_7 82..139 CDD:290234 17/61 (28%)
EFh 85..139 CDD:238008 16/58 (28%)
Capn13NP_001020304.1 Peptidase_C2 35..329 CDD:279042
Calpain_III 345..477 CDD:294111
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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