DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg-2 and Gca

DIOPT Version :10

Sequence 1:NP_001104459.2 Gene:Alg-2 / 3355106 FlyBaseID:FBgn0086378 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_663498.1 Gene:Gca / 227960 MGIID:1918521 Length:220 Species:Mus musculus


Alignment Length:174 Identity:62/174 - (35%)
Similarity:95/174 - (54%) Gaps:7/174 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAYNHDGMPDQQFLWDVFQRVDKDRSGHISADELQVALS----NGTWSAFNPETIRLMIGMFDRE 61
            :.|:....|....:|..|..| ..:.|.:.|:|||..|:    :||::.|:.||.|:||.|.||:
Mouse    44 LGYSDSYSPADDSMWTYFTAV-AGQDGEVDAEELQRCLTQSGISGTYAPFSLETCRIMIAMLDRD 107

  Fly    62 NKGTVSFKDFGALWKYVTDWQNCFRSFDRDNSGNIDKTELKTALTSFGYRLSDHLIDVLLRKFDR 126
            ..|.:.|.:|..||..:..|:..|.:.|:|.||.::..||..|:...|||||...:..::|::.:
Mouse   108 YTGKMGFNEFKELWAALNAWKQNFMTIDQDQSGTVEHHELSQAIALMGYRLSPQTLAAIVRRYSK 172

  Fly   127 FGRGTILFDDFIQCCIVLYTLTTAFRQHDTDLDGIITIHYEQFL 170
            .||  |.|||::.||:.|..||..||:.|....||:...||.||
Mouse   173 NGR--IFFDDYVACCVKLRALTDFFRRRDHLQQGIVNFMYEDFL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg-2NP_001104459.2 EFh_PEF_ALG-2 13..177 CDD:320058 60/162 (37%)
EF-hand motif 13..42 CDD:320058 9/32 (28%)
EF-hand motif 50..79 CDD:320058 12/28 (43%)
EF-hand motif 80..110 CDD:320058 9/29 (31%)
EF-hand motif 116..145 CDD:320058 9/28 (32%)
EF-hand motif 146..177 CDD:320058 11/25 (44%)
GcaNP_663498.1 EFh_PEF_grancalcin 56..220 CDD:320061 60/162 (37%)
EF-hand motif 56..84 CDD:320061 9/28 (32%)
EF-hand motif 96..125 CDD:320061 12/28 (43%)
EF-hand motif 126..156 CDD:320061 9/29 (31%)
EF-hand motif 162..189 CDD:320061 9/28 (32%)
EF-hand motif 190..220 CDD:320061 11/25 (44%)

Return to query results.
Submit another query.