DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpb5 and fshb

DIOPT Version :9

Sequence 1:NP_001104334.1 Gene:Gpb5 / 3355097 FlyBaseID:FBgn0063368 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_991187.1 Gene:fshb / 402919 ZFINID:ZDB-GENE-040806-1 Length:130 Species:Danio rerio


Alignment Length:139 Identity:34/139 - (24%)
Similarity:51/139 - (36%) Gaps:35/139 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VLVSVSSSSLSEIKPMNNGHIVTPLGCHRRVYTYKVTQSDLQGHECWDYVSV--WSCWGRCDSSE 81
            :|:.|..|:.||.:            |..|:....:|   ::..||...|::  .:|.|.|.:  
Zfish    10 LLLPVLMSAESECR------------CSCRLTNISIT---VESEECGSCVTIDTTACAGLCWT-- 57

  Fly    82 ISDWKFPYKRSFH--PVCVHAQRQLVVAILKNCHPKAEDSVSKYQYMEAVNCHCQ---------- 134
             .|..:|...:.|  .||............|.| |...|||  :.|..|::|.|.          
Zfish    58 -MDRVYPSSMAQHTQKVCNFKNLMYKSYEFKGC-PAGVDSV--FVYPVALSCECNQVNSDTTDWG 118

  Fly   135 TCSTQDTSC 143
            ..|.|.|||
Zfish   119 AISPQTTSC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpb5NP_001104334.1 GHB_like 45..144 CDD:200450 29/113 (26%)
fshbNP_991187.1 GHB 22..128 CDD:214502 29/127 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577502
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362225at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11515
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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