DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpb5 and LOC100490615

DIOPT Version :9

Sequence 1:NP_001104334.1 Gene:Gpb5 / 3355097 FlyBaseID:FBgn0063368 Length:169 Species:Drosophila melanogaster
Sequence 2:XP_002939281.1 Gene:LOC100490615 / 100490615 -ID:- Length:137 Species:Xenopus tropicalis


Alignment Length:101 Identity:21/101 - (20%)
Similarity:38/101 - (37%) Gaps:11/101 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CHRRVYTYKVTQSDLQGHECWDYVSVWS--CWGRCDSSEISDWKFPYKRSFHPVCVHAQRQLVVA 107
            ||....|....:.|     |...|::.:  |.|.|.:.: ..:|......:..:|.:.:.:....
 Frog    24 CHPTNATISAEKDD-----CPICVTLTTTICSGYCLTRD-PVFKNALSSVYQNICTYNEIRYDTI 82

  Fly   108 ILKNCHPKAEDSVSKYQYMEAVNCHCQTCSTQDTSC 143
            .|.:|.|..:..   :.|..||:|.|..|....:.|
 Frog    83 KLPDCLPGTDPF---FTYPVAVSCKCNQCKMDYSDC 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpb5NP_001104334.1 GHB_like 45..144 CDD:200450 21/101 (21%)
LOC100490615XP_002939281.1 GHB 20..126 CDD:214502 21/101 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362225at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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