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Protein Alignment Gpb5 and lhb
DIOPT Version :9
Sequence 1: | NP_001104334.1 |
Gene: | Gpb5 / 3355097 |
FlyBaseID: | FBgn0063368 |
Length: | 169 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002939280.1 |
Gene: | lhb / 100038205 |
XenbaseID: | XB-GENE-486113 |
Length: | 332 |
Species: | Xenopus tropicalis |
Alignment Length: | 34 |
Identity: | 9/34 - (26%) |
Similarity: | 15/34 - (44%) |
Gaps: | 10/34 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 RVYTYKVTQSDLQGHECWDYVSVW------SCWG 75
|.:|.| :|:|:...|.::.| ..||
Frog 193 RAFTAK----ELEGYPKKDILTYWQAEDYPKAWG 222
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Gpb5 | NP_001104334.1 |
GHB_like |
45..144 |
CDD:200450 |
9/34 (26%) |
lhb | XP_002939280.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
57 |
1.000 |
Domainoid score |
I10675 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
62 |
1.000 |
Inparanoid score |
I5203 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11515 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.060 |
|
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