DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim23 and TIM23-2

DIOPT Version :10

Sequence 1:NP_001015387.1 Gene:Tim23 / 3355096 FlyBaseID:FBgn0267976 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_177419.1 Gene:TIM23-2 / 843607 AraportID:AT1G72750 Length:188 Species:Arabidopsis thaliana


Alignment Length:154 Identity:47/154 - (30%)
Similarity:80/154 - (51%) Gaps:15/154 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SPYLNYD-----SRYLQQ--AQPEFIFPEGANKQRGRF--ELAFSQIGTSVMIGGGIGGLAGVYN 94
            :||.||:     |:||.:  ..|||:|.|.|.:||..:  .|.| ..||:.:.|...|...||..
plant    19 NPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTF-YTGTAYLGGSVAGASVGVIT 82

  Fly    95 GLKVTKALEQKGKVRRTQLLNHIMKQGSGTANTLGTLTVLYSA--CGVLLQFFRGEDDHINTVIA 157
            |:|..::.:.. |::..::||...:.|....|.:|.:.::|:.  .|::....|  ||...:|:|
plant    83 GVKSFESGDTT-KLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDR--DDVWTSVVA 144

  Fly   158 GSATGLLYKSTAGLRTCAFGGAIG 181
            |..||.:.::..|:|:.|..||:|
plant   145 GLGTGAVCRAARGVRSAAVAGALG 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim23NP_001015387.1 TIM22 42..188 CDD:470560 45/151 (30%)
TIM23-2NP_177419.1 TIM22 34..160 CDD:470560 36/129 (28%)

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