DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim23 and ATOEP16-2

DIOPT Version :10

Sequence 1:NP_001015387.1 Gene:Tim23 / 3355096 FlyBaseID:FBgn0267976 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_849394.1 Gene:ATOEP16-2 / 827308 AraportID:AT4G16160 Length:178 Species:Arabidopsis thaliana


Alignment Length:346 Identity:71/346 - (20%)
Similarity:125/346 - (36%) Gaps:91/346 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNFKVDVVSLTKTDM-EFDMIGIDAAFANA 100
            :|.....:|.||       |..||..|.|:..::.....|.:.|....|: ||....::..:...
plant    36 LSTGGGGSHHAS-------VPLTEVVDPVEFEDYLITHPVSIDSGPLRDLYEFPTDDVEVLYVQR 93

  Fly   101 FRRILIAEVP-----SMAIEKVLIAYNTSVIIDEVLAHRM--GLIPIAADPR------LFEYLSE 152
            ..|.:::.||     ...::..:.:|.....|.....|::  |..|...|.:      |.:.:.|
plant    94 ECRTMVSSVPEENEMDSHVKDCIRSYTEDWAIVNRKYHKLGTGFNPNTLDKQKERQKGLPKQVFE 158

  Fly   153 HDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSELLRESENKTSKPKTYTSFSCSQDSL 217
            .|:.:|.|:                        :..:..::.|.|.:....|:  .|::||...|
plant   159 SDEVSESNS------------------------YQDDQDDMKRRSMSIDDTPR--GSWACSIFDL 197

  Fly   218 PEFANNPITPCDLDILIAKLAPGQEIELEAHAVKGIGKT--HAKWSPVGTAWYRMHPEVVLRGEV 280
            ...|::.:.|..||     ..|.:||:   |..:...|:  |.:       .:.:||:     :.
plant   198 KNSASDALVPNLLD-----RTPNEEID---HQNEDQRKSSRHKE-------LFALHPD-----QD 242

  Fly   281 EDELAERL-VNVCPQNVFDIEDMGKGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVK----- 339
            |||..||| |...|:..|.        :|..|    ||...|..:..:.:...:.|..||     
plant   243 EDEPIERLSVPEVPKEHFG--------QRLLV----KCLSLKFEIEIEPIFASLALYDVKEKKKI 295

  Fly   340 -NHFIFNIES---TGSLPPEV 356
             .:|.|::.|   .|.|.|.|
plant   296 SENFYFDLNSEQIKGMLRPYV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim23NP_001015387.1 TIM22 42..188 CDD:470560 27/159 (17%)
ATOEP16-2NP_849394.1 Tim17 28..166 CDD:460567 27/136 (20%)

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