DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim23 and TIM23-3

DIOPT Version :10

Sequence 1:NP_001015387.1 Gene:Tim23 / 3355096 FlyBaseID:FBgn0267976 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_187131.1 Gene:TIM23-3 / 819640 AraportID:AT3G04800 Length:188 Species:Arabidopsis thaliana


Alignment Length:184 Identity:53/184 - (28%)
Similarity:89/184 - (48%) Gaps:27/184 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HAATHEEASKPHYTTTTSSFSRTPVSPY----LNYDSRYLQQAQPEFIFPEGANKQRGRF--ELA 72
            |:..|::..|           ....:||    |.|...|.....|||:|.|.|.|:|..:  .|.
plant     7 HSTGHQQQQK-----------YRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLT 60

  Fly    73 FSQIGTSVMIGGGIGGLAGVYNGLKVTKALEQKGKVRRTQLLNH---IMKQGSGTANTLGTLTVL 134
            |. .|.....|..:|...|...|::..:..|.. |:|..::||.   :.::|   .|.||::.::
plant    61 FF-TGWGYCTGSVLGAFKGTIAGMRAAERGESL-KIRTNRILNSGGLVARRG---GNCLGSVGLM 120

  Fly   135 YSACGVLLQFFR-GEDDHINTVIAGSATGLLYKSTAGLRTCAFGGAIGLGISSL 187
            ::|....:.:.| |:|..:.|||||.|||:||::.:|.|:....||:| |:::|
plant   121 FAAMESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVG-GVAAL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim23NP_001015387.1 TIM22 42..188 CDD:470560 48/152 (32%)
TIM23-3NP_187131.1 TIM22 33..160 CDD:470560 40/131 (31%)

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