DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim23 and timm-23

DIOPT Version :10

Sequence 1:NP_001015387.1 Gene:Tim23 / 3355096 FlyBaseID:FBgn0267976 Length:206 Species:Drosophila melanogaster
Sequence 2:NP_492953.1 Gene:timm-23 / 173041 WormBaseID:WBGene00008857 Length:242 Species:Caenorhabditis elegans


Alignment Length:206 Identity:68/206 - (33%)
Similarity:96/206 - (46%) Gaps:30/206 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NFSRTPYSDGHAATHEEASKPHYTTTTSSFSRTPV-----------------SPYLNYDSRYLQQ 51
            ||| .|   |..|...|.|.|.:    |.|...||                 :||:..|......
 Worm    32 NFS-VP---GFDAPAPEPSVPDH----SPFPAAPVLALDQLKSAGVGVSRQMTPYVQMDPSMFAS 88

  Fly    52 AQPEFIFPEGANKQRGRFELAFSQIGTSVMIGG--GIGGLAGVYNGLKVTKALEQKGKVRRTQLL 114
            .||::|.|||....:|:||.|...||.:|  ||  |:|...|....|...:..:..||...|:::
 Worm    89 QQPQYIMPEGGVAGKGKFEFALGHIGWAV--GGAFGVGCARGALGELMNPETRKMVGKPWMTRMV 151

  Fly   115 NHIMKQGSGTANTLGTLTVLYSACGVLLQFFRGEDDHINTVIAGSATGLLYKSTAGLRTCAFGGA 179
            |..||.|||.|...|.:..:|||..:.|:..|.||: :|...||:.||.:|:|..||:....|..
 Worm   152 NATMKHGSGFAQPSGAIVFMYSALEIGLRSVRAEDE-LNGFGAGALTGAIYRSPHGLKASGVGAL 215

  Fly   180 IGLGISSLYCL 190
            :||||::.:.|
 Worm   216 VGLGIAAAWTL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim23NP_001015387.1 TIM22 42..188 CDD:470560 52/147 (35%)
timm-23NP_492953.1 Tim17 110..217 CDD:460567 37/109 (34%)

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