DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12567 and PCD1

DIOPT Version :10

Sequence 1:NP_001015384.1 Gene:CG12567 / 3355094 FlyBaseID:FBgn0039958 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_013252.1 Gene:PCD1 / 850844 SGDID:S000004141 Length:340 Species:Saccharomyces cerevisiae


Alignment Length:261 Identity:55/261 - (21%)
Similarity:88/261 - (33%) Gaps:93/261 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LCIWLQQRSNTKETWPGKWDNMVGGGLSVGFGIKET----AIKEAAEEASIPSD----------L 202
            |.:.|.:||.|..::.|  |....||.:..|  :||    |.:||.||..:|.|          .
Yeast    54 LRVLLTKRSRTLRSFSG--DVSFPGGKADYF--QETFESVARREAEEEIGLPHDPEVLHKEFGMK 114

  Fly   203 VKNLV-SAGC------------VSFYFESRQGLFPNTEYVFDLELPLDF---------------- 238
            :.||| ...|            |.|.::.:.     .::....::|||.                
Yeast   115 LDNLVMDMPCYLSRTFLSVKPMVCFLYKDKL-----EKHEDKYKVPLDIRKFFGKLNPGETSSLF 174

  Fly   239 -VPQN---------ADGEVQAFELLTAKDCVERVFTSDFKTTSAPVVIDFLIRHGHITADDVVDF 293
             ||.|         ||.:|::::    .:..||   .::|.....  |.:||.|.|.        
Yeast   175 SVPLNDLVIHLLPEADEDVKSYQ----AEYFER---KEYKLNWGG--IKWLIMHYHF-------- 222

  Fly   294 TQIVELLHVP-LQSIYTYKTRFEQSIKQPQFLPGDSKNCNCAIF------------QKISMENGH 345
             .:.....:| ||:|....:..|..:....|...|.....|.|.            :|:..|.||
Yeast   223 -HVANNNEMPWLQTIEDLSSSDEDGVDGGIFRFRDLWGLTCKILFDVSCIANGLMDEKLKGELGH 286

  Fly   346 K 346
            :
Yeast   287 E 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12567NP_001015384.1 DUF4743 11..136 CDD:406365
NUDIX_Tnr3_like 131..282 CDD:467544 40/182 (22%)
PCD1NP_013252.1 NUDIX_CoAse_Nudt7 38..211 CDD:467532 37/172 (22%)
Blue background indicates that the domain is not in the aligned region.

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