DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12567 and ndx-2

DIOPT Version :9

Sequence 1:NP_001015384.1 Gene:CG12567 / 3355094 FlyBaseID:FBgn0039958 Length:349 Species:Drosophila melanogaster
Sequence 2:NP_503726.1 Gene:ndx-2 / 189126 WormBaseID:WBGene00003579 Length:223 Species:Caenorhabditis elegans


Alignment Length:197 Identity:41/197 - (20%)
Similarity:66/197 - (33%) Gaps:60/197 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 QRSNTKETWPGKW--DNMVGGGLSVGFGIKETAIKEAAEEASIPSDLVKNLVSAGCVSFYFESR- 219
            |..|.:..|.|||  ...||.....|    :..:.::....:.|.:     .||..||.....| 
 Worm    30 QLFNQEVVWNGKWIQTRQVGFKTHTG----QVGVWQSVHRNTKPVE-----ASADGVSIIARVRK 85

  Fly   220 QGLFPNTEYV------------FDLELPLDFVP-------------QNADGEVQAFELLTAKDC- 258
            ||..    |:            ..||||...:.             :...|.|....::.:|.| 
 Worm    86 QGKL----YIVLVKQYRIPCGKLCLELPAGLIDAGETAQQAAIRELKEETGYVSGKVVMESKLCF 146

  Fly   259 VERVFTSDFKTTSAPVVIDFLIRHGHITAD--------DVVDFTQIVELLHVPLQSIYTYKTRFE 315
            ::...|.|   :...||:|       :..|        .|:|.|:.:|:|.|...::..|.|..:
 Worm   147 LDPGLTDD---SQCLVVVD-------VDGDAPENQNPVQVLDSTESIEVLLVEQSALMAYVTNLD 201

  Fly   316 QS 317
            .|
 Worm   202 SS 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12567NP_001015384.1 DUF4743 11..136 CDD:292538
Nudix_hydrolase_3 106..283 CDD:239648 31/153 (20%)
ndx-2NP_503726.1 ADPRase_NUDT5 75..221 CDD:239516 29/143 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.