DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40470 and APE2

DIOPT Version :9

Sequence 1:NP_001036635.1 Gene:CG40470 / 3355093 FlyBaseID:FBgn0058470 Length:941 Species:Drosophila melanogaster
Sequence 2:NP_012765.3 Gene:APE2 / 853699 SGDID:S000001640 Length:952 Species:Saccharomyces cerevisiae


Alignment Length:934 Identity:201/934 - (21%)
Similarity:388/934 - (41%) Gaps:148/934 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPKEVLPLSYEVLIEPHMDNQNFEGSIRMHLRWIGDSKKVYFHAHDTLLIDVSQINLTTLNMGDG 117
            ||..|:||.|::.:||......||||:::.|       |:...|.||:.::....::.:..:||.
Yeast   102 LPDNVVPLHYDLTVEPDFKTFKFEGSVKIEL-------KINNPAIDTVTLNTVDTDIHSAKIGDV 159

  Fly   118 TLDKNVIILRGVRLPRKPVFVLYLKDKIKKGSECLLDIYFQGNISETEEGLFRSYYTNSGNDGEE 182
            |  .:.||....:......|........|  ....|||.|.|.:::...|.:|:.|.:. ..||.
Yeast   160 T--SSEIISEEEQQVTTFAFPKGTMSSFK--GNAFLDIKFTGILNDNMAGFYRAKYEDK-LTGET 219

  Fly   183 IYLA-TNLKPNNARRLFPCFDEPGIKVPFNVSIARPKGYITLFNTPLHNTINHPKLRSYSLD--- 243
            .|:| |.::|.:|||.|||||||.:|..|.:::........|.|..:.|        .|..|   
Yeast   220 KYMATTQMEPTDARRAFPCFDEPNLKASFAITLVSDPSLTHLSNMDVKN--------EYVKDGKK 276

  Fly   244 --FFHTTAPMSTHAFGFVILKLHMWNEHKIVKSSD--IPAINIWS---NNLSSTNLLDIQNKLNV 301
              .|:||..|||:...|::.:|      |.|:|.:  || :.:::   |........|:..|   
Yeast   277 VTLFNTTPKMSTYLVAFIVAEL------KYVESKNFRIP-VRVYATPGNEKHGQFAADLTAK--- 331

  Fly   302 AHTTIQHF---FNIPLPLTKLDVIAIPSLAT-------LPFISASGILIARESEILKK--DVFE- 353
               |:..|   |.|..||.|:|.:|:...:.       |.......:|:.:::..|.:  .|.| 
Yeast   332 ---TLAFFEKTFGIQYPLPKMDNVAVHEFSAGAMENWGLVTYRVVDLLLDKDNSTLDRIQRVAEV 393

  Fly   354 ISRELIYQWIGIWITPEWWTDANVNKALISFIASEIVFEINGGIEFNGKYPMTILY---SLYYEL 415
            :..||.:||.|..:|.:||....:|:...::::   .:..|   ||..::.:...|   :|.:.|
Yeast   394 VQHELAHQWFGNLVTMDWWEGLWLNEGFATWMS---WYSCN---EFQPEWKVWEQYVTDTLQHAL 452

  Fly   416 S-KRYPNSH-----------ITGIKHEFASIKVQLIIRMLSLTVGKYTFRLGIQSFICDYKFKTY 468
            | ....:||           |..|....:..|...::||:|..:|:.||..|:..::..:|:...
Yeast   453 SLDSLRSSHPIEVPVKKADEINQIFDAISYSKGASLLRMISKWLGEETFIKGVSQYLNKFKYGNA 517

  Fly   469 KSSDFWNAITTQAKADNSLDSDLSILSIAESWLEHSRLPLVTIIRDYDSETAIVQQKVYLRERLH 533
            |:.|.|:|:...:..|        :.|:...|.:....|::::..|.:.:....|.: ||...  
Yeast   518 KTEDLWDALADASGKD--------VRSVMNIWTKKVGFPVISVSEDGNGKITFRQNR-YLSTA-- 571

  Fly   534 DV-PDQDNMLWWIPIALKRQDSLSFVNTGSFKWMNKTRQMLISNLPSKNMFIIVNEEEIGPFPVN 597
            || ||:|..::.:.:|||.::.:.    .|.....:::.:.:.: |:   |..||.|:.|.:..:
Yeast   572 DVKPDEDKTIYPVFLALKTKNGVD----SSVVLSERSKTIELED-PT---FFKVNSEQSGIYITS 628

  Fly   598 YDDNNWNMLSKYLRTEEKRESIPVYTRAKLLHDAWNLAYAGELNFSTALNVTLFLKYERNHIVWS 662
            |.|..|..|.      ::.:.:.|..|..|:.|...|:.:|..:.:..||:......|::.:||.
Yeast   629 YTDERWAKLG------QQADLLSVEDRVGLVADVKTLSASGYTSTTNFLNLVSKWNNEKSFVVWD 687

  Fly   663 PVFTFLDQVGKR--LEKSSINKKFELYIIELLAPLYEYLGTAHFNEDINITELRKLTT-SFLCKA 724
            .:...:..:...  .|........:.:..:|::.:..:||....:.|...|:..|:|. ...|.|
Yeast   688 QIINSISSMKSTWLFEPKETQDALDNFTKQLISGMTHHLGWEFKSSDSFSTQRLKVTMFGAACAA 752

  Fly   725 GYFPCFKEARRAFNIWIN---SSFPNFETPVPNEYICSIFKWGSMKEWMFGLDRLCEFPKSRIQS 786
            ......|.|.:.|..:.:   .:.|....|:....:..:   |..:.:    :::.:.....|.:
Yeast   753 RDADVEKAALKMFTDYCSGNKEAIPALIKPIVFNTVARV---GGAENY----EKVYKIYLDPISN 810

  Fly   787 DRTHLLKMLAGCPAQRDKIFILLELAILKNISIFSDTDKMLIISTVTSRSI------------GY 839
            |               :|:..|..|...|...:...|...|...||.::.|            |.
Yeast   811 D---------------EKLAALRSLGRFKEPKLLERTLGYLFDGTVLNQDIYIPMQGMRAHQEGV 860

  Fly   840 TTLLDFLSNNWDDIHHKFYNNTNIWTKLISSATGMFSTQEGYDLVKKFY-DEHYGHFGRAQHIIE 903
            ..|.:::..|||::..:.....::...:::..|..|::.:..|.:|||: .:....|.::   :.
Yeast   861 EALWNWVKKNWDELVKRLPPGLSMLGSVVTLGTSGFTSMQKIDEIKKFFATKSTKGFDQS---LA 922

  Fly   904 KSLRNIKEGIQWSKQNIPVIEEWI 927
            :||..|....||..::..|:.:::
Yeast   923 QSLDTITSKAQWVNRDRDVVNKYL 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40470NP_001036635.1 GluZincin 60..503 CDD:301352 117/481 (24%)
ERAP1_C 584..906 CDD:288671 58/340 (17%)
APE2NP_012765.3 PepN 90..941 CDD:223385 200/927 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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