DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpS5 and Mrps5

DIOPT Version :9

Sequence 1:NP_001036652.1 Gene:mRpS5 / 3355089 FlyBaseID:FBgn0287187 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001099975.1 Gene:Mrps5 / 296134 RGDID:1308318 Length:432 Species:Rattus norvegicus


Alignment Length:292 Identity:133/292 - (45%)
Similarity:180/292 - (61%) Gaps:4/292 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RNTSFFNKLPAEDIWRGVTAVSNAGKKRGRGKGSGKKVAKDLNKGQSIGFGKCGRIWPGLNSPLI 104
            |..|||.||.||::|:|..|.:.||.::||||.:.||..|||||||.||.|:.|.:|||||.|||
  Rat    87 RPYSFFTKLTAEELWKGALAETGAGARKGRGKRTKKKKKKDLNKGQIIGEGRSGFLWPGLNVPLI 151

  Fly   105 RGN--ELINQQKLNENLDRENGILKLRDSMGSFKLMKLNPIDRGWSGSKMPGRSIGPPDP-VGDE 166
            :..  :.|.|:...|....|..:.:.|:.....:.:|:.. :|||||:...|.||||||| ...|
  Rat   152 KSGVVQNIGQRSKEEQQKVEADMAEQREEWDRKRKIKVKR-ERGWSGNTWGGVSIGPPDPGPNGE 215

  Fly   167 EFVSFDTRVLENKIVFIMKGNMGRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQK 231
            .:..||||:||.:.||.|....|||:...||...|||||.||||..||.:...|.||:||||...
  Rat   216 TYEDFDTRILEVRNVFNMTAKEGRKKSVRVLVAVGNGNGAAGFAVGKAADRADAFRKAKNRAIHY 280

  Fly   232 LINISLCENRTIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGSTNIQ 296
            |..|...|..|||||....|.:|.|...::|.||||.|||||.|||::|||||:|||:.||.|:.
  Rat   281 LHYIERYEGHTIFHDISLRFKRTHIRMKKQPRGYGLRCHRAIITICRLIGIKDMYAKVNGSVNML 345

  Fly   297 NIAKAFFIGLMTQRSYQYIANETNSNIVQLQK 328
            |:.:..|.||..|.::|::|::...::|:.::
  Rat   346 NLTRGLFHGLARQETHQHLADKKGLHVVEFRE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS5NP_001036652.1 Ribosomal_S5 171..235 CDD:278748 33/63 (52%)
rpsE_bact 178..323 CDD:130093 68/144 (47%)
Ribosomal_S5_C 251..318 CDD:281681 34/66 (52%)
Mrps5NP_001099975.1 rpsE_bact 219..374 CDD:130093 74/154 (48%)
Ribosomal_S5 220..285 CDD:278748 33/64 (52%)
Ribosomal_S5_C 299..367 CDD:281681 34/67 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336926
Domainoid 1 1.000 106 1.000 Domainoid score I6464
eggNOG 1 0.900 - - E1_COG0098
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32726
Inparanoid 1 1.050 244 1.000 Inparanoid score I3212
OMA 1 1.010 - - QHG45760
OrthoDB 1 1.010 - - D1262134at2759
OrthoFinder 1 1.000 - - FOG0003644
OrthoInspector 1 1.000 - - oto97483
orthoMCL 1 0.900 - - OOG6_104516
Panther 1 1.100 - - LDO PTHR13718
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5316
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.